Interface OmicsClient

All Superinterfaces:

AutoCloseable, AwsClient, SdkAutoCloseable, SdkClient

@Generated("software.amazon.awssdk:codegen")
@ThreadSafe
public interface OmicsClient
extends AwsClient

Service client for accessing Amazon Omics. This can be created using the static builder() method.

This is the AWS HealthOmics API Reference. For an introduction to the service, see What is AWS HealthOmics? in the AWS HealthOmics User Guide.

Field Summary

Fields

Modifier and Type	Field	Description
static final String	SERVICE_METADATA_ID	Value for looking up the service's metadata from the ServiceMetadataProvider.
static final String	SERVICE_NAME

Method Summary

Modifier and Type	Method	Description
default AbortMultipartReadSetUploadResponse	abortMultipartReadSetUpload(Consumer<AbortMultipartReadSetUploadRequest.Builder> abortMultipartReadSetUploadRequest)	Stops a multipart upload.
default AbortMultipartReadSetUploadResponse	abortMultipartReadSetUpload(AbortMultipartReadSetUploadRequest abortMultipartReadSetUploadRequest)	Stops a multipart upload.
default AcceptShareResponse	acceptShare(Consumer<AcceptShareRequest.Builder> acceptShareRequest)	Accept a resource share request.
default AcceptShareResponse	acceptShare(AcceptShareRequest acceptShareRequest)	Accept a resource share request.
default BatchDeleteReadSetResponse	batchDeleteReadSet(Consumer<BatchDeleteReadSetRequest.Builder> batchDeleteReadSetRequest)	Deletes one or more read sets.
default BatchDeleteReadSetResponse	batchDeleteReadSet(BatchDeleteReadSetRequest batchDeleteReadSetRequest)	Deletes one or more read sets.
static OmicsClientBuilder	builder()	Create a builder that can be used to configure and create a OmicsClient.
default CancelAnnotationImportJobResponse	cancelAnnotationImportJob(Consumer<CancelAnnotationImportJobRequest.Builder> cancelAnnotationImportJobRequest)	Cancels an annotation import job.
default CancelAnnotationImportJobResponse	cancelAnnotationImportJob(CancelAnnotationImportJobRequest cancelAnnotationImportJobRequest)	Cancels an annotation import job.
default CancelRunResponse	cancelRun(Consumer<CancelRunRequest.Builder> cancelRunRequest)	Cancels a run.
default CancelRunResponse	cancelRun(CancelRunRequest cancelRunRequest)	Cancels a run.
default CancelVariantImportJobResponse	cancelVariantImportJob(Consumer<CancelVariantImportJobRequest.Builder> cancelVariantImportJobRequest)	Cancels a variant import job.
default CancelVariantImportJobResponse	cancelVariantImportJob(CancelVariantImportJobRequest cancelVariantImportJobRequest)	Cancels a variant import job.
default CompleteMultipartReadSetUploadResponse	completeMultipartReadSetUpload(Consumer<CompleteMultipartReadSetUploadRequest.Builder> completeMultipartReadSetUploadRequest)	Concludes a multipart upload once you have uploaded all the components.
default CompleteMultipartReadSetUploadResponse	completeMultipartReadSetUpload(CompleteMultipartReadSetUploadRequest completeMultipartReadSetUploadRequest)	Concludes a multipart upload once you have uploaded all the components.
static OmicsClient	create()	Create a OmicsClient with the region loaded from the DefaultAwsRegionProviderChain and credentials loaded from the DefaultCredentialsProvider.
default CreateAnnotationStoreResponse	createAnnotationStore(Consumer<CreateAnnotationStoreRequest.Builder> createAnnotationStoreRequest)	Creates an annotation store.
default CreateAnnotationStoreResponse	createAnnotationStore(CreateAnnotationStoreRequest createAnnotationStoreRequest)	Creates an annotation store.
default CreateAnnotationStoreVersionResponse	createAnnotationStoreVersion(Consumer<CreateAnnotationStoreVersionRequest.Builder> createAnnotationStoreVersionRequest)	Creates a new version of an annotation store.
default CreateAnnotationStoreVersionResponse	createAnnotationStoreVersion(CreateAnnotationStoreVersionRequest createAnnotationStoreVersionRequest)	Creates a new version of an annotation store.
default CreateMultipartReadSetUploadResponse	createMultipartReadSetUpload(Consumer<CreateMultipartReadSetUploadRequest.Builder> createMultipartReadSetUploadRequest)	Begins a multipart read set upload.
default CreateMultipartReadSetUploadResponse	createMultipartReadSetUpload(CreateMultipartReadSetUploadRequest createMultipartReadSetUploadRequest)	Begins a multipart read set upload.
default CreateReferenceStoreResponse	createReferenceStore(Consumer<CreateReferenceStoreRequest.Builder> createReferenceStoreRequest)	Creates a reference store.
default CreateReferenceStoreResponse	createReferenceStore(CreateReferenceStoreRequest createReferenceStoreRequest)	Creates a reference store.
default CreateRunCacheResponse	createRunCache(Consumer<CreateRunCacheRequest.Builder> createRunCacheRequest)	You can create a run cache to save the task outputs from completed tasks in a run for a private workflow.
default CreateRunCacheResponse	createRunCache(CreateRunCacheRequest createRunCacheRequest)	You can create a run cache to save the task outputs from completed tasks in a run for a private workflow.
default CreateRunGroupResponse	createRunGroup(Consumer<CreateRunGroupRequest.Builder> createRunGroupRequest)	You can optionally create a run group to limit the compute resources for the runs that you add to the group.
default CreateRunGroupResponse	createRunGroup(CreateRunGroupRequest createRunGroupRequest)	You can optionally create a run group to limit the compute resources for the runs that you add to the group.
default CreateSequenceStoreResponse	createSequenceStore(Consumer<CreateSequenceStoreRequest.Builder> createSequenceStoreRequest)	Creates a sequence store.
default CreateSequenceStoreResponse	createSequenceStore(CreateSequenceStoreRequest createSequenceStoreRequest)	Creates a sequence store.
default CreateShareResponse	createShare(Consumer<CreateShareRequest.Builder> createShareRequest)	Creates a cross-account shared resource.
default CreateShareResponse	createShare(CreateShareRequest createShareRequest)	Creates a cross-account shared resource.
default CreateVariantStoreResponse	createVariantStore(Consumer<CreateVariantStoreRequest.Builder> createVariantStoreRequest)	Creates a variant store.
default CreateVariantStoreResponse	createVariantStore(CreateVariantStoreRequest createVariantStoreRequest)	Creates a variant store.
default CreateWorkflowResponse	createWorkflow(Consumer<CreateWorkflowRequest.Builder> createWorkflowRequest)	Creates a private workflow.Private workflows depend on a variety of resources that you create and configure before creating the workflow:
default CreateWorkflowResponse	createWorkflow(CreateWorkflowRequest createWorkflowRequest)	Creates a private workflow.Private workflows depend on a variety of resources that you create and configure before creating the workflow:
default CreateWorkflowVersionResponse	createWorkflowVersion(Consumer<CreateWorkflowVersionRequest.Builder> createWorkflowVersionRequest)	Creates a new workflow version for the workflow that you specify with the workflowId parameter.
default CreateWorkflowVersionResponse	createWorkflowVersion(CreateWorkflowVersionRequest createWorkflowVersionRequest)	Creates a new workflow version for the workflow that you specify with the workflowId parameter.
default DeleteAnnotationStoreResponse	deleteAnnotationStore(Consumer<DeleteAnnotationStoreRequest.Builder> deleteAnnotationStoreRequest)	Deletes an annotation store.
default DeleteAnnotationStoreResponse	deleteAnnotationStore(DeleteAnnotationStoreRequest deleteAnnotationStoreRequest)	Deletes an annotation store.
default DeleteAnnotationStoreVersionsResponse	deleteAnnotationStoreVersions(Consumer<DeleteAnnotationStoreVersionsRequest.Builder> deleteAnnotationStoreVersionsRequest)	Deletes one or multiple versions of an annotation store.
default DeleteAnnotationStoreVersionsResponse	deleteAnnotationStoreVersions(DeleteAnnotationStoreVersionsRequest deleteAnnotationStoreVersionsRequest)	Deletes one or multiple versions of an annotation store.
default DeleteReferenceResponse	deleteReference(Consumer<DeleteReferenceRequest.Builder> deleteReferenceRequest)	Deletes a genome reference.
default DeleteReferenceResponse	deleteReference(DeleteReferenceRequest deleteReferenceRequest)	Deletes a genome reference.
default DeleteReferenceStoreResponse	deleteReferenceStore(Consumer<DeleteReferenceStoreRequest.Builder> deleteReferenceStoreRequest)	Deletes a genome reference store.
default DeleteReferenceStoreResponse	deleteReferenceStore(DeleteReferenceStoreRequest deleteReferenceStoreRequest)	Deletes a genome reference store.
default DeleteRunResponse	deleteRun(Consumer<DeleteRunRequest.Builder> deleteRunRequest)	Deletes a workflow run.
default DeleteRunResponse	deleteRun(DeleteRunRequest deleteRunRequest)	Deletes a workflow run.
default DeleteRunCacheResponse	deleteRunCache(Consumer<DeleteRunCacheRequest.Builder> deleteRunCacheRequest)	Delete a run cache.
default DeleteRunCacheResponse	deleteRunCache(DeleteRunCacheRequest deleteRunCacheRequest)	Delete a run cache.
default DeleteRunGroupResponse	deleteRunGroup(Consumer<DeleteRunGroupRequest.Builder> deleteRunGroupRequest)	Deletes a workflow run group.
default DeleteRunGroupResponse	deleteRunGroup(DeleteRunGroupRequest deleteRunGroupRequest)	Deletes a workflow run group.
default DeleteS3AccessPolicyResponse	deleteS3AccessPolicy(Consumer<DeleteS3AccessPolicyRequest.Builder> deleteS3AccessPolicyRequest)	Deletes an access policy for the specified store.
default DeleteS3AccessPolicyResponse	deleteS3AccessPolicy(DeleteS3AccessPolicyRequest deleteS3AccessPolicyRequest)	Deletes an access policy for the specified store.
default DeleteSequenceStoreResponse	deleteSequenceStore(Consumer<DeleteSequenceStoreRequest.Builder> deleteSequenceStoreRequest)	Deletes a sequence store.
default DeleteSequenceStoreResponse	deleteSequenceStore(DeleteSequenceStoreRequest deleteSequenceStoreRequest)	Deletes a sequence store.
default DeleteShareResponse	deleteShare(Consumer<DeleteShareRequest.Builder> deleteShareRequest)	Deletes a resource share.
default DeleteShareResponse	deleteShare(DeleteShareRequest deleteShareRequest)	Deletes a resource share.
default DeleteVariantStoreResponse	deleteVariantStore(Consumer<DeleteVariantStoreRequest.Builder> deleteVariantStoreRequest)	Deletes a variant store.
default DeleteVariantStoreResponse	deleteVariantStore(DeleteVariantStoreRequest deleteVariantStoreRequest)	Deletes a variant store.
default DeleteWorkflowResponse	deleteWorkflow(Consumer<DeleteWorkflowRequest.Builder> deleteWorkflowRequest)	Deletes a workflow.
default DeleteWorkflowResponse	deleteWorkflow(DeleteWorkflowRequest deleteWorkflowRequest)	Deletes a workflow.
default DeleteWorkflowVersionResponse	deleteWorkflowVersion(Consumer<DeleteWorkflowVersionRequest.Builder> deleteWorkflowVersionRequest)	Deletes a workflow version.
default DeleteWorkflowVersionResponse	deleteWorkflowVersion(DeleteWorkflowVersionRequest deleteWorkflowVersionRequest)	Deletes a workflow version.
default GetAnnotationImportJobResponse	getAnnotationImportJob(Consumer<GetAnnotationImportJobRequest.Builder> getAnnotationImportJobRequest)	Gets information about an annotation import job.
default GetAnnotationImportJobResponse	getAnnotationImportJob(GetAnnotationImportJobRequest getAnnotationImportJobRequest)	Gets information about an annotation import job.
default GetAnnotationStoreResponse	getAnnotationStore(Consumer<GetAnnotationStoreRequest.Builder> getAnnotationStoreRequest)	Gets information about an annotation store.
default GetAnnotationStoreResponse	getAnnotationStore(GetAnnotationStoreRequest getAnnotationStoreRequest)	Gets information about an annotation store.
default GetAnnotationStoreVersionResponse	getAnnotationStoreVersion(Consumer<GetAnnotationStoreVersionRequest.Builder> getAnnotationStoreVersionRequest)	Retrieves the metadata for an annotation store version.
default GetAnnotationStoreVersionResponse	getAnnotationStoreVersion(GetAnnotationStoreVersionRequest getAnnotationStoreVersionRequest)	Retrieves the metadata for an annotation store version.
default ResponseInputStream<GetReadSetResponse>	getReadSet(Consumer<GetReadSetRequest.Builder> getReadSetRequest)	Gets a file from a read set.
default GetReadSetResponse	getReadSet(Consumer<GetReadSetRequest.Builder> getReadSetRequest, Path destinationPath)	Gets a file from a read set.
default <ReturnT> ReturnT	getReadSet(Consumer<GetReadSetRequest.Builder> getReadSetRequest, ResponseTransformer<GetReadSetResponse,ReturnT> responseTransformer)	Gets a file from a read set.
default ResponseInputStream<GetReadSetResponse>	getReadSet(GetReadSetRequest getReadSetRequest)	Gets a file from a read set.
default GetReadSetResponse	getReadSet(GetReadSetRequest getReadSetRequest, Path destinationPath)	Gets a file from a read set.
default <ReturnT> ReturnT	getReadSet(GetReadSetRequest getReadSetRequest, ResponseTransformer<GetReadSetResponse,ReturnT> responseTransformer)	Gets a file from a read set.
default GetReadSetActivationJobResponse	getReadSetActivationJob(Consumer<GetReadSetActivationJobRequest.Builder> getReadSetActivationJobRequest)	Gets information about a read set activation job.
default GetReadSetActivationJobResponse	getReadSetActivationJob(GetReadSetActivationJobRequest getReadSetActivationJobRequest)	Gets information about a read set activation job.
default ResponseBytes<GetReadSetResponse>	getReadSetAsBytes(Consumer<GetReadSetRequest.Builder> getReadSetRequest)	Gets a file from a read set.
default ResponseBytes<GetReadSetResponse>	getReadSetAsBytes(GetReadSetRequest getReadSetRequest)	Gets a file from a read set.
default GetReadSetExportJobResponse	getReadSetExportJob(Consumer<GetReadSetExportJobRequest.Builder> getReadSetExportJobRequest)	Gets information about a read set export job.
default GetReadSetExportJobResponse	getReadSetExportJob(GetReadSetExportJobRequest getReadSetExportJobRequest)	Gets information about a read set export job.
default GetReadSetImportJobResponse	getReadSetImportJob(Consumer<GetReadSetImportJobRequest.Builder> getReadSetImportJobRequest)	Gets information about a read set import job.
default GetReadSetImportJobResponse	getReadSetImportJob(GetReadSetImportJobRequest getReadSetImportJobRequest)	Gets information about a read set import job.
default GetReadSetMetadataResponse	getReadSetMetadata(Consumer<GetReadSetMetadataRequest.Builder> getReadSetMetadataRequest)	Gets details about a read set.
default GetReadSetMetadataResponse	getReadSetMetadata(GetReadSetMetadataRequest getReadSetMetadataRequest)	Gets details about a read set.
default ResponseInputStream<GetReferenceResponse>	getReference(Consumer<GetReferenceRequest.Builder> getReferenceRequest)	Gets a reference file.
default GetReferenceResponse	getReference(Consumer<GetReferenceRequest.Builder> getReferenceRequest, Path destinationPath)	Gets a reference file.
default <ReturnT> ReturnT	getReference(Consumer<GetReferenceRequest.Builder> getReferenceRequest, ResponseTransformer<GetReferenceResponse,ReturnT> responseTransformer)	Gets a reference file.
default ResponseInputStream<GetReferenceResponse>	getReference(GetReferenceRequest getReferenceRequest)	Gets a reference file.
default GetReferenceResponse	getReference(GetReferenceRequest getReferenceRequest, Path destinationPath)	Gets a reference file.
default <ReturnT> ReturnT	getReference(GetReferenceRequest getReferenceRequest, ResponseTransformer<GetReferenceResponse,ReturnT> responseTransformer)	Gets a reference file.
default ResponseBytes<GetReferenceResponse>	getReferenceAsBytes(Consumer<GetReferenceRequest.Builder> getReferenceRequest)	Gets a reference file.
default ResponseBytes<GetReferenceResponse>	getReferenceAsBytes(GetReferenceRequest getReferenceRequest)	Gets a reference file.
default GetReferenceImportJobResponse	getReferenceImportJob(Consumer<GetReferenceImportJobRequest.Builder> getReferenceImportJobRequest)	Gets information about a reference import job.
default GetReferenceImportJobResponse	getReferenceImportJob(GetReferenceImportJobRequest getReferenceImportJobRequest)	Gets information about a reference import job.
default GetReferenceMetadataResponse	getReferenceMetadata(Consumer<GetReferenceMetadataRequest.Builder> getReferenceMetadataRequest)	Gets information about a genome reference's metadata.
default GetReferenceMetadataResponse	getReferenceMetadata(GetReferenceMetadataRequest getReferenceMetadataRequest)	Gets information about a genome reference's metadata.
default GetReferenceStoreResponse	getReferenceStore(Consumer<GetReferenceStoreRequest.Builder> getReferenceStoreRequest)	Gets information about a reference store.
default GetReferenceStoreResponse	getReferenceStore(GetReferenceStoreRequest getReferenceStoreRequest)	Gets information about a reference store.
default GetRunResponse	getRun(Consumer<GetRunRequest.Builder> getRunRequest)	Gets information about a workflow run.
default GetRunResponse	getRun(GetRunRequest getRunRequest)	Gets information about a workflow run.
default GetRunCacheResponse	getRunCache(Consumer<GetRunCacheRequest.Builder> getRunCacheRequest)	Retrieve the details for the specified run cache.
default GetRunCacheResponse	getRunCache(GetRunCacheRequest getRunCacheRequest)	Retrieve the details for the specified run cache.
default GetRunGroupResponse	getRunGroup(Consumer<GetRunGroupRequest.Builder> getRunGroupRequest)	Gets information about a workflow run group.
default GetRunGroupResponse	getRunGroup(GetRunGroupRequest getRunGroupRequest)	Gets information about a workflow run group.
default GetRunTaskResponse	getRunTask(Consumer<GetRunTaskRequest.Builder> getRunTaskRequest)	Gets information about a workflow run task.
default GetRunTaskResponse	getRunTask(GetRunTaskRequest getRunTaskRequest)	Gets information about a workflow run task.
default GetS3AccessPolicyResponse	getS3AccessPolicy(Consumer<GetS3AccessPolicyRequest.Builder> getS3AccessPolicyRequest)	Retrieves details about an access policy on a given store.
default GetS3AccessPolicyResponse	getS3AccessPolicy(GetS3AccessPolicyRequest getS3AccessPolicyRequest)	Retrieves details about an access policy on a given store.
default GetSequenceStoreResponse	getSequenceStore(Consumer<GetSequenceStoreRequest.Builder> getSequenceStoreRequest)	Gets information about a sequence store.
default GetSequenceStoreResponse	getSequenceStore(GetSequenceStoreRequest getSequenceStoreRequest)	Gets information about a sequence store.
default GetShareResponse	getShare(Consumer<GetShareRequest.Builder> getShareRequest)	Retrieves the metadata for the specified resource share.
default GetShareResponse	getShare(GetShareRequest getShareRequest)	Retrieves the metadata for the specified resource share.
default GetVariantImportJobResponse	getVariantImportJob(Consumer<GetVariantImportJobRequest.Builder> getVariantImportJobRequest)	Gets information about a variant import job.
default GetVariantImportJobResponse	getVariantImportJob(GetVariantImportJobRequest getVariantImportJobRequest)	Gets information about a variant import job.
default GetVariantStoreResponse	getVariantStore(Consumer<GetVariantStoreRequest.Builder> getVariantStoreRequest)	Gets information about a variant store.
default GetVariantStoreResponse	getVariantStore(GetVariantStoreRequest getVariantStoreRequest)	Gets information about a variant store.
default GetWorkflowResponse	getWorkflow(Consumer<GetWorkflowRequest.Builder> getWorkflowRequest)	Gets information about a workflow.
default GetWorkflowResponse	getWorkflow(GetWorkflowRequest getWorkflowRequest)	Gets information about a workflow.
default GetWorkflowVersionResponse	getWorkflowVersion(Consumer<GetWorkflowVersionRequest.Builder> getWorkflowVersionRequest)	Gets information about a workflow version.
default GetWorkflowVersionResponse	getWorkflowVersion(GetWorkflowVersionRequest getWorkflowVersionRequest)	Gets information about a workflow version.
default ListAnnotationImportJobsResponse	listAnnotationImportJobs(Consumer<ListAnnotationImportJobsRequest.Builder> listAnnotationImportJobsRequest)	Retrieves a list of annotation import jobs.
default ListAnnotationImportJobsResponse	listAnnotationImportJobs(ListAnnotationImportJobsRequest listAnnotationImportJobsRequest)	Retrieves a list of annotation import jobs.
default ListAnnotationImportJobsIterable	listAnnotationImportJobsPaginator(Consumer<ListAnnotationImportJobsRequest.Builder> listAnnotationImportJobsRequest)	This is a variant of listAnnotationImportJobs(software.amazon.awssdk.services.omics.model.ListAnnotationImportJobsRequest) operation.
default ListAnnotationImportJobsIterable	listAnnotationImportJobsPaginator(ListAnnotationImportJobsRequest listAnnotationImportJobsRequest)	This is a variant of listAnnotationImportJobs(software.amazon.awssdk.services.omics.model.ListAnnotationImportJobsRequest) operation.
default ListAnnotationStoresResponse	listAnnotationStores(Consumer<ListAnnotationStoresRequest.Builder> listAnnotationStoresRequest)	Retrieves a list of annotation stores.
default ListAnnotationStoresResponse	listAnnotationStores(ListAnnotationStoresRequest listAnnotationStoresRequest)	Retrieves a list of annotation stores.
default ListAnnotationStoresIterable	listAnnotationStoresPaginator(Consumer<ListAnnotationStoresRequest.Builder> listAnnotationStoresRequest)	This is a variant of listAnnotationStores(software.amazon.awssdk.services.omics.model.ListAnnotationStoresRequest) operation.
default ListAnnotationStoresIterable	listAnnotationStoresPaginator(ListAnnotationStoresRequest listAnnotationStoresRequest)	This is a variant of listAnnotationStores(software.amazon.awssdk.services.omics.model.ListAnnotationStoresRequest) operation.
default ListAnnotationStoreVersionsResponse	listAnnotationStoreVersions(Consumer<ListAnnotationStoreVersionsRequest.Builder> listAnnotationStoreVersionsRequest)	Lists the versions of an annotation store.
default ListAnnotationStoreVersionsResponse	listAnnotationStoreVersions(ListAnnotationStoreVersionsRequest listAnnotationStoreVersionsRequest)	Lists the versions of an annotation store.
default ListAnnotationStoreVersionsIterable	listAnnotationStoreVersionsPaginator(Consumer<ListAnnotationStoreVersionsRequest.Builder> listAnnotationStoreVersionsRequest)	This is a variant of listAnnotationStoreVersions(software.amazon.awssdk.services.omics.model.ListAnnotationStoreVersionsRequest) operation.
default ListAnnotationStoreVersionsIterable	listAnnotationStoreVersionsPaginator(ListAnnotationStoreVersionsRequest listAnnotationStoreVersionsRequest)	This is a variant of listAnnotationStoreVersions(software.amazon.awssdk.services.omics.model.ListAnnotationStoreVersionsRequest) operation.
default ListMultipartReadSetUploadsResponse	listMultipartReadSetUploads(Consumer<ListMultipartReadSetUploadsRequest.Builder> listMultipartReadSetUploadsRequest)	Lists multipart read set uploads and for in progress uploads.
default ListMultipartReadSetUploadsResponse	listMultipartReadSetUploads(ListMultipartReadSetUploadsRequest listMultipartReadSetUploadsRequest)	Lists multipart read set uploads and for in progress uploads.
default ListMultipartReadSetUploadsIterable	listMultipartReadSetUploadsPaginator(Consumer<ListMultipartReadSetUploadsRequest.Builder> listMultipartReadSetUploadsRequest)	This is a variant of listMultipartReadSetUploads(software.amazon.awssdk.services.omics.model.ListMultipartReadSetUploadsRequest) operation.
default ListMultipartReadSetUploadsIterable	listMultipartReadSetUploadsPaginator(ListMultipartReadSetUploadsRequest listMultipartReadSetUploadsRequest)	This is a variant of listMultipartReadSetUploads(software.amazon.awssdk.services.omics.model.ListMultipartReadSetUploadsRequest) operation.
default ListReadSetActivationJobsResponse	listReadSetActivationJobs(Consumer<ListReadSetActivationJobsRequest.Builder> listReadSetActivationJobsRequest)	Retrieves a list of read set activation jobs.
default ListReadSetActivationJobsResponse	listReadSetActivationJobs(ListReadSetActivationJobsRequest listReadSetActivationJobsRequest)	Retrieves a list of read set activation jobs.
default ListReadSetActivationJobsIterable	listReadSetActivationJobsPaginator(Consumer<ListReadSetActivationJobsRequest.Builder> listReadSetActivationJobsRequest)	This is a variant of listReadSetActivationJobs(software.amazon.awssdk.services.omics.model.ListReadSetActivationJobsRequest) operation.
default ListReadSetActivationJobsIterable	listReadSetActivationJobsPaginator(ListReadSetActivationJobsRequest listReadSetActivationJobsRequest)	This is a variant of listReadSetActivationJobs(software.amazon.awssdk.services.omics.model.ListReadSetActivationJobsRequest) operation.
default ListReadSetExportJobsResponse	listReadSetExportJobs(Consumer<ListReadSetExportJobsRequest.Builder> listReadSetExportJobsRequest)	Retrieves a list of read set export jobs.
default ListReadSetExportJobsResponse	listReadSetExportJobs(ListReadSetExportJobsRequest listReadSetExportJobsRequest)	Retrieves a list of read set export jobs.
default ListReadSetExportJobsIterable	listReadSetExportJobsPaginator(Consumer<ListReadSetExportJobsRequest.Builder> listReadSetExportJobsRequest)	This is a variant of listReadSetExportJobs(software.amazon.awssdk.services.omics.model.ListReadSetExportJobsRequest) operation.
default ListReadSetExportJobsIterable	listReadSetExportJobsPaginator(ListReadSetExportJobsRequest listReadSetExportJobsRequest)	This is a variant of listReadSetExportJobs(software.amazon.awssdk.services.omics.model.ListReadSetExportJobsRequest) operation.
default ListReadSetImportJobsResponse	listReadSetImportJobs(Consumer<ListReadSetImportJobsRequest.Builder> listReadSetImportJobsRequest)	Retrieves a list of read set import jobs.
default ListReadSetImportJobsResponse	listReadSetImportJobs(ListReadSetImportJobsRequest listReadSetImportJobsRequest)	Retrieves a list of read set import jobs.
default ListReadSetImportJobsIterable	listReadSetImportJobsPaginator(Consumer<ListReadSetImportJobsRequest.Builder> listReadSetImportJobsRequest)	This is a variant of listReadSetImportJobs(software.amazon.awssdk.services.omics.model.ListReadSetImportJobsRequest) operation.
default ListReadSetImportJobsIterable	listReadSetImportJobsPaginator(ListReadSetImportJobsRequest listReadSetImportJobsRequest)	This is a variant of listReadSetImportJobs(software.amazon.awssdk.services.omics.model.ListReadSetImportJobsRequest) operation.
default ListReadSetsResponse	listReadSets(Consumer<ListReadSetsRequest.Builder> listReadSetsRequest)	Retrieves a list of read sets.
default ListReadSetsResponse	listReadSets(ListReadSetsRequest listReadSetsRequest)	Retrieves a list of read sets.
default ListReadSetsIterable	listReadSetsPaginator(Consumer<ListReadSetsRequest.Builder> listReadSetsRequest)	This is a variant of listReadSets(software.amazon.awssdk.services.omics.model.ListReadSetsRequest) operation.
default ListReadSetsIterable	listReadSetsPaginator(ListReadSetsRequest listReadSetsRequest)	This is a variant of listReadSets(software.amazon.awssdk.services.omics.model.ListReadSetsRequest) operation.
default ListReadSetUploadPartsResponse	listReadSetUploadParts(Consumer<ListReadSetUploadPartsRequest.Builder> listReadSetUploadPartsRequest)	This operation will list all parts in a requested multipart upload for a sequence store.
default ListReadSetUploadPartsResponse	listReadSetUploadParts(ListReadSetUploadPartsRequest listReadSetUploadPartsRequest)	This operation will list all parts in a requested multipart upload for a sequence store.
default ListReadSetUploadPartsIterable	listReadSetUploadPartsPaginator(Consumer<ListReadSetUploadPartsRequest.Builder> listReadSetUploadPartsRequest)	This is a variant of listReadSetUploadParts(software.amazon.awssdk.services.omics.model.ListReadSetUploadPartsRequest) operation.
default ListReadSetUploadPartsIterable	listReadSetUploadPartsPaginator(ListReadSetUploadPartsRequest listReadSetUploadPartsRequest)	This is a variant of listReadSetUploadParts(software.amazon.awssdk.services.omics.model.ListReadSetUploadPartsRequest) operation.
default ListReferenceImportJobsResponse	listReferenceImportJobs(Consumer<ListReferenceImportJobsRequest.Builder> listReferenceImportJobsRequest)	Retrieves a list of reference import jobs.
default ListReferenceImportJobsResponse	listReferenceImportJobs(ListReferenceImportJobsRequest listReferenceImportJobsRequest)	Retrieves a list of reference import jobs.
default ListReferenceImportJobsIterable	listReferenceImportJobsPaginator(Consumer<ListReferenceImportJobsRequest.Builder> listReferenceImportJobsRequest)	This is a variant of listReferenceImportJobs(software.amazon.awssdk.services.omics.model.ListReferenceImportJobsRequest) operation.
default ListReferenceImportJobsIterable	listReferenceImportJobsPaginator(ListReferenceImportJobsRequest listReferenceImportJobsRequest)	This is a variant of listReferenceImportJobs(software.amazon.awssdk.services.omics.model.ListReferenceImportJobsRequest) operation.
default ListReferencesResponse	listReferences(Consumer<ListReferencesRequest.Builder> listReferencesRequest)	Retrieves a list of references.
default ListReferencesResponse	listReferences(ListReferencesRequest listReferencesRequest)	Retrieves a list of references.
default ListReferencesIterable	listReferencesPaginator(Consumer<ListReferencesRequest.Builder> listReferencesRequest)	This is a variant of listReferences(software.amazon.awssdk.services.omics.model.ListReferencesRequest) operation.
default ListReferencesIterable	listReferencesPaginator(ListReferencesRequest listReferencesRequest)	This is a variant of listReferences(software.amazon.awssdk.services.omics.model.ListReferencesRequest) operation.
default ListReferenceStoresResponse	listReferenceStores(Consumer<ListReferenceStoresRequest.Builder> listReferenceStoresRequest)	Retrieves a list of reference stores.
default ListReferenceStoresResponse	listReferenceStores(ListReferenceStoresRequest listReferenceStoresRequest)	Retrieves a list of reference stores.
default ListReferenceStoresIterable	listReferenceStoresPaginator(Consumer<ListReferenceStoresRequest.Builder> listReferenceStoresRequest)	This is a variant of listReferenceStores(software.amazon.awssdk.services.omics.model.ListReferenceStoresRequest) operation.
default ListReferenceStoresIterable	listReferenceStoresPaginator(ListReferenceStoresRequest listReferenceStoresRequest)	This is a variant of listReferenceStores(software.amazon.awssdk.services.omics.model.ListReferenceStoresRequest) operation.
default ListRunCachesResponse	listRunCaches(Consumer<ListRunCachesRequest.Builder> listRunCachesRequest)	Retrieves a list of your run caches.
default ListRunCachesResponse	listRunCaches(ListRunCachesRequest listRunCachesRequest)	Retrieves a list of your run caches.
default ListRunCachesIterable	listRunCachesPaginator(Consumer<ListRunCachesRequest.Builder> listRunCachesRequest)	This is a variant of listRunCaches(software.amazon.awssdk.services.omics.model.ListRunCachesRequest) operation.
default ListRunCachesIterable	listRunCachesPaginator(ListRunCachesRequest listRunCachesRequest)	This is a variant of listRunCaches(software.amazon.awssdk.services.omics.model.ListRunCachesRequest) operation.
default ListRunGroupsResponse	listRunGroups(Consumer<ListRunGroupsRequest.Builder> listRunGroupsRequest)	Retrieves a list of run groups.
default ListRunGroupsResponse	listRunGroups(ListRunGroupsRequest listRunGroupsRequest)	Retrieves a list of run groups.
default ListRunGroupsIterable	listRunGroupsPaginator(Consumer<ListRunGroupsRequest.Builder> listRunGroupsRequest)	This is a variant of listRunGroups(software.amazon.awssdk.services.omics.model.ListRunGroupsRequest) operation.
default ListRunGroupsIterable	listRunGroupsPaginator(ListRunGroupsRequest listRunGroupsRequest)	This is a variant of listRunGroups(software.amazon.awssdk.services.omics.model.ListRunGroupsRequest) operation.
default ListRunsResponse	listRuns(Consumer<ListRunsRequest.Builder> listRunsRequest)	Retrieves a list of runs.
default ListRunsResponse	listRuns(ListRunsRequest listRunsRequest)	Retrieves a list of runs.
default ListRunsIterable	listRunsPaginator(Consumer<ListRunsRequest.Builder> listRunsRequest)	This is a variant of listRuns(software.amazon.awssdk.services.omics.model.ListRunsRequest) operation.
default ListRunsIterable	listRunsPaginator(ListRunsRequest listRunsRequest)	This is a variant of listRuns(software.amazon.awssdk.services.omics.model.ListRunsRequest) operation.
default ListRunTasksResponse	listRunTasks(Consumer<ListRunTasksRequest.Builder> listRunTasksRequest)	Retrieves a list of tasks for a run.
default ListRunTasksResponse	listRunTasks(ListRunTasksRequest listRunTasksRequest)	Retrieves a list of tasks for a run.
default ListRunTasksIterable	listRunTasksPaginator(Consumer<ListRunTasksRequest.Builder> listRunTasksRequest)	This is a variant of listRunTasks(software.amazon.awssdk.services.omics.model.ListRunTasksRequest) operation.
default ListRunTasksIterable	listRunTasksPaginator(ListRunTasksRequest listRunTasksRequest)	This is a variant of listRunTasks(software.amazon.awssdk.services.omics.model.ListRunTasksRequest) operation.
default ListSequenceStoresResponse	listSequenceStores(Consumer<ListSequenceStoresRequest.Builder> listSequenceStoresRequest)	Retrieves a list of sequence stores.
default ListSequenceStoresResponse	listSequenceStores(ListSequenceStoresRequest listSequenceStoresRequest)	Retrieves a list of sequence stores.
default ListSequenceStoresIterable	listSequenceStoresPaginator(Consumer<ListSequenceStoresRequest.Builder> listSequenceStoresRequest)	This is a variant of listSequenceStores(software.amazon.awssdk.services.omics.model.ListSequenceStoresRequest) operation.
default ListSequenceStoresIterable	listSequenceStoresPaginator(ListSequenceStoresRequest listSequenceStoresRequest)	This is a variant of listSequenceStores(software.amazon.awssdk.services.omics.model.ListSequenceStoresRequest) operation.
default ListSharesResponse	listShares(Consumer<ListSharesRequest.Builder> listSharesRequest)	Retrieves the resource shares associated with an account.
default ListSharesResponse	listShares(ListSharesRequest listSharesRequest)	Retrieves the resource shares associated with an account.
default ListSharesIterable	listSharesPaginator(Consumer<ListSharesRequest.Builder> listSharesRequest)	This is a variant of listShares(software.amazon.awssdk.services.omics.model.ListSharesRequest) operation.
default ListSharesIterable	listSharesPaginator(ListSharesRequest listSharesRequest)	This is a variant of listShares(software.amazon.awssdk.services.omics.model.ListSharesRequest) operation.
default ListTagsForResourceResponse	listTagsForResource(Consumer<ListTagsForResourceRequest.Builder> listTagsForResourceRequest)	Retrieves a list of tags for a resource.
default ListTagsForResourceResponse	listTagsForResource(ListTagsForResourceRequest listTagsForResourceRequest)	Retrieves a list of tags for a resource.
default ListVariantImportJobsResponse	listVariantImportJobs(Consumer<ListVariantImportJobsRequest.Builder> listVariantImportJobsRequest)	Retrieves a list of variant import jobs.
default ListVariantImportJobsResponse	listVariantImportJobs(ListVariantImportJobsRequest listVariantImportJobsRequest)	Retrieves a list of variant import jobs.
default ListVariantImportJobsIterable	listVariantImportJobsPaginator(Consumer<ListVariantImportJobsRequest.Builder> listVariantImportJobsRequest)	This is a variant of listVariantImportJobs(software.amazon.awssdk.services.omics.model.ListVariantImportJobsRequest) operation.
default ListVariantImportJobsIterable	listVariantImportJobsPaginator(ListVariantImportJobsRequest listVariantImportJobsRequest)	This is a variant of listVariantImportJobs(software.amazon.awssdk.services.omics.model.ListVariantImportJobsRequest) operation.
default ListVariantStoresResponse	listVariantStores(Consumer<ListVariantStoresRequest.Builder> listVariantStoresRequest)	Retrieves a list of variant stores.
default ListVariantStoresResponse	listVariantStores(ListVariantStoresRequest listVariantStoresRequest)	Retrieves a list of variant stores.
default ListVariantStoresIterable	listVariantStoresPaginator(Consumer<ListVariantStoresRequest.Builder> listVariantStoresRequest)	This is a variant of listVariantStores(software.amazon.awssdk.services.omics.model.ListVariantStoresRequest) operation.
default ListVariantStoresIterable	listVariantStoresPaginator(ListVariantStoresRequest listVariantStoresRequest)	This is a variant of listVariantStores(software.amazon.awssdk.services.omics.model.ListVariantStoresRequest) operation.
default ListWorkflowsResponse	listWorkflows(Consumer<ListWorkflowsRequest.Builder> listWorkflowsRequest)	Retrieves a list of workflows.
default ListWorkflowsResponse	listWorkflows(ListWorkflowsRequest listWorkflowsRequest)	Retrieves a list of workflows.
default ListWorkflowsIterable	listWorkflowsPaginator(Consumer<ListWorkflowsRequest.Builder> listWorkflowsRequest)	This is a variant of listWorkflows(software.amazon.awssdk.services.omics.model.ListWorkflowsRequest) operation.
default ListWorkflowsIterable	listWorkflowsPaginator(ListWorkflowsRequest listWorkflowsRequest)	This is a variant of listWorkflows(software.amazon.awssdk.services.omics.model.ListWorkflowsRequest) operation.
default ListWorkflowVersionsResponse	listWorkflowVersions(Consumer<ListWorkflowVersionsRequest.Builder> listWorkflowVersionsRequest)	Lists the workflow versions for the specified workflow.
default ListWorkflowVersionsResponse	listWorkflowVersions(ListWorkflowVersionsRequest listWorkflowVersionsRequest)	Lists the workflow versions for the specified workflow.
default ListWorkflowVersionsIterable	listWorkflowVersionsPaginator(Consumer<ListWorkflowVersionsRequest.Builder> listWorkflowVersionsRequest)	This is a variant of listWorkflowVersions(software.amazon.awssdk.services.omics.model.ListWorkflowVersionsRequest) operation.
default ListWorkflowVersionsIterable	listWorkflowVersionsPaginator(ListWorkflowVersionsRequest listWorkflowVersionsRequest)	This is a variant of listWorkflowVersions(software.amazon.awssdk.services.omics.model.ListWorkflowVersionsRequest) operation.
default PutS3AccessPolicyResponse	putS3AccessPolicy(Consumer<PutS3AccessPolicyRequest.Builder> putS3AccessPolicyRequest)	Adds an access policy to the specified store.
default PutS3AccessPolicyResponse	putS3AccessPolicy(PutS3AccessPolicyRequest putS3AccessPolicyRequest)	Adds an access policy to the specified store.
default OmicsServiceClientConfiguration	serviceClientConfiguration()	The SDK service client configuration exposes client settings to the user, e.g., ClientOverrideConfiguration
static ServiceMetadata	serviceMetadata()
default StartAnnotationImportJobResponse	startAnnotationImportJob(Consumer<StartAnnotationImportJobRequest.Builder> startAnnotationImportJobRequest)	Starts an annotation import job.
default StartAnnotationImportJobResponse	startAnnotationImportJob(StartAnnotationImportJobRequest startAnnotationImportJobRequest)	Starts an annotation import job.
default StartReadSetActivationJobResponse	startReadSetActivationJob(Consumer<StartReadSetActivationJobRequest.Builder> startReadSetActivationJobRequest)	Activates an archived read set.
default StartReadSetActivationJobResponse	startReadSetActivationJob(StartReadSetActivationJobRequest startReadSetActivationJobRequest)	Activates an archived read set.
default StartReadSetExportJobResponse	startReadSetExportJob(Consumer<StartReadSetExportJobRequest.Builder> startReadSetExportJobRequest)	Exports a read set to Amazon S3.
default StartReadSetExportJobResponse	startReadSetExportJob(StartReadSetExportJobRequest startReadSetExportJobRequest)	Exports a read set to Amazon S3.
default StartReadSetImportJobResponse	startReadSetImportJob(Consumer<StartReadSetImportJobRequest.Builder> startReadSetImportJobRequest)	Starts a read set import job.
default StartReadSetImportJobResponse	startReadSetImportJob(StartReadSetImportJobRequest startReadSetImportJobRequest)	Starts a read set import job.
default StartReferenceImportJobResponse	startReferenceImportJob(Consumer<StartReferenceImportJobRequest.Builder> startReferenceImportJobRequest)	Starts a reference import job.
default StartReferenceImportJobResponse	startReferenceImportJob(StartReferenceImportJobRequest startReferenceImportJobRequest)	Starts a reference import job.
default StartRunResponse	startRun(Consumer<StartRunRequest.Builder> startRunRequest)	Starts a new run or duplicates an existing run.
default StartRunResponse	startRun(StartRunRequest startRunRequest)	Starts a new run or duplicates an existing run.
default StartVariantImportJobResponse	startVariantImportJob(Consumer<StartVariantImportJobRequest.Builder> startVariantImportJobRequest)	Starts a variant import job.
default StartVariantImportJobResponse	startVariantImportJob(StartVariantImportJobRequest startVariantImportJobRequest)	Starts a variant import job.
default TagResourceResponse	tagResource(Consumer<TagResourceRequest.Builder> tagResourceRequest)	Tags a resource.
default TagResourceResponse	tagResource(TagResourceRequest tagResourceRequest)	Tags a resource.
default UntagResourceResponse	untagResource(Consumer<UntagResourceRequest.Builder> untagResourceRequest)	Removes tags from a resource.
default UntagResourceResponse	untagResource(UntagResourceRequest untagResourceRequest)	Removes tags from a resource.
default UpdateAnnotationStoreResponse	updateAnnotationStore(Consumer<UpdateAnnotationStoreRequest.Builder> updateAnnotationStoreRequest)	Updates an annotation store.
default UpdateAnnotationStoreResponse	updateAnnotationStore(UpdateAnnotationStoreRequest updateAnnotationStoreRequest)	Updates an annotation store.
default UpdateAnnotationStoreVersionResponse	updateAnnotationStoreVersion(Consumer<UpdateAnnotationStoreVersionRequest.Builder> updateAnnotationStoreVersionRequest)	Updates the description of an annotation store version.
default UpdateAnnotationStoreVersionResponse	updateAnnotationStoreVersion(UpdateAnnotationStoreVersionRequest updateAnnotationStoreVersionRequest)	Updates the description of an annotation store version.
default UpdateRunCacheResponse	updateRunCache(Consumer<UpdateRunCacheRequest.Builder> updateRunCacheRequest)	Update a run cache.
default UpdateRunCacheResponse	updateRunCache(UpdateRunCacheRequest updateRunCacheRequest)	Update a run cache.
default UpdateRunGroupResponse	updateRunGroup(Consumer<UpdateRunGroupRequest.Builder> updateRunGroupRequest)	Updates a run group.
default UpdateRunGroupResponse	updateRunGroup(UpdateRunGroupRequest updateRunGroupRequest)	Updates a run group.
default UpdateSequenceStoreResponse	updateSequenceStore(Consumer<UpdateSequenceStoreRequest.Builder> updateSequenceStoreRequest)	Update one or more parameters for the sequence store.
default UpdateSequenceStoreResponse	updateSequenceStore(UpdateSequenceStoreRequest updateSequenceStoreRequest)	Update one or more parameters for the sequence store.
default UpdateVariantStoreResponse	updateVariantStore(Consumer<UpdateVariantStoreRequest.Builder> updateVariantStoreRequest)	Updates a variant store.
default UpdateVariantStoreResponse	updateVariantStore(UpdateVariantStoreRequest updateVariantStoreRequest)	Updates a variant store.
default UpdateWorkflowResponse	updateWorkflow(Consumer<UpdateWorkflowRequest.Builder> updateWorkflowRequest)	Updates information about a workflow.
default UpdateWorkflowResponse	updateWorkflow(UpdateWorkflowRequest updateWorkflowRequest)	Updates information about a workflow.
default UpdateWorkflowVersionResponse	updateWorkflowVersion(Consumer<UpdateWorkflowVersionRequest.Builder> updateWorkflowVersionRequest)	Updates information about the workflow version.
default UpdateWorkflowVersionResponse	updateWorkflowVersion(UpdateWorkflowVersionRequest updateWorkflowVersionRequest)	Updates information about the workflow version.
default UploadReadSetPartResponse	uploadReadSetPart(Consumer<UploadReadSetPartRequest.Builder> uploadReadSetPartRequest, Path sourcePath)	This operation uploads a specific part of a read set.
default UploadReadSetPartResponse	uploadReadSetPart(Consumer<UploadReadSetPartRequest.Builder> uploadReadSetPartRequest, RequestBody requestBody)	This operation uploads a specific part of a read set.
default UploadReadSetPartResponse	uploadReadSetPart(UploadReadSetPartRequest uploadReadSetPartRequest, Path sourcePath)	This operation uploads a specific part of a read set.
default UploadReadSetPartResponse	uploadReadSetPart(UploadReadSetPartRequest uploadReadSetPartRequest, RequestBody requestBody)	This operation uploads a specific part of a read set.
default OmicsWaiter	waiter()	Create an instance of OmicsWaiter using this client.

Methods inherited from interface software.amazon.awssdk.utils.SdkAutoCloseable

close

Methods inherited from interface software.amazon.awssdk.core.SdkClient

serviceName

Field Details

SERVICE_NAME

static final String SERVICE_NAME

See Also:

• Constant Field Values

SERVICE_METADATA_ID

static final String SERVICE_METADATA_ID

Value for looking up the service's metadata from the ServiceMetadataProvider.

See Also:

• Constant Field Values

Method Details

abortMultipartReadSetUpload

default AbortMultipartReadSetUploadResponse abortMultipartReadSetUpload(AbortMultipartReadSetUploadRequest abortMultipartReadSetUploadRequest)
                                                                 throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Stops a multipart upload.

Parameters:

abortMultipartReadSetUploadRequest -

Returns:

Result of the AbortMultipartReadSetUpload operation returned by the service.

See Also:

• AWS API Documentation

abortMultipartReadSetUpload

default AbortMultipartReadSetUploadResponse abortMultipartReadSetUpload(Consumer<AbortMultipartReadSetUploadRequest.Builder> abortMultipartReadSetUploadRequest)
                                                                 throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Stops a multipart upload.

This is a convenience which creates an instance of the AbortMultipartReadSetUploadRequest.Builder avoiding the need to create one manually via AbortMultipartReadSetUploadRequest.builder()

Parameters:

abortMultipartReadSetUploadRequest - A Consumer that will call methods on AbortMultipartReadSetUploadRequest.Builder to create a request.

Returns:

Result of the AbortMultipartReadSetUpload operation returned by the service.

See Also:

• AWS API Documentation

acceptShare

default AcceptShareResponse acceptShare(AcceptShareRequest acceptShareRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Accept a resource share request.

Parameters:

acceptShareRequest -

Returns:

Result of the AcceptShare operation returned by the service.

See Also:

• AWS API Documentation

acceptShare

default AcceptShareResponse acceptShare(Consumer<AcceptShareRequest.Builder> acceptShareRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Accept a resource share request.

This is a convenience which creates an instance of the AcceptShareRequest.Builder avoiding the need to create one manually via AcceptShareRequest.builder()

Parameters:

acceptShareRequest - A Consumer that will call methods on AcceptShareRequest.Builder to create a request.

Returns:

Result of the AcceptShare operation returned by the service.

See Also:

• AWS API Documentation

batchDeleteReadSet

default BatchDeleteReadSetResponse batchDeleteReadSet(BatchDeleteReadSetRequest batchDeleteReadSetRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes one or more read sets.

Parameters:

batchDeleteReadSetRequest -

Returns:

Result of the BatchDeleteReadSet operation returned by the service.

See Also:

• AWS API Documentation

batchDeleteReadSet

default BatchDeleteReadSetResponse batchDeleteReadSet(Consumer<BatchDeleteReadSetRequest.Builder> batchDeleteReadSetRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes one or more read sets.

This is a convenience which creates an instance of the BatchDeleteReadSetRequest.Builder avoiding the need to create one manually via BatchDeleteReadSetRequest.builder()

Parameters:

batchDeleteReadSetRequest - A Consumer that will call methods on BatchDeleteReadSetRequest.Builder to create a request.

Returns:

Result of the BatchDeleteReadSet operation returned by the service.

See Also:

• AWS API Documentation

cancelAnnotationImportJob

default CancelAnnotationImportJobResponse cancelAnnotationImportJob(CancelAnnotationImportJobRequest cancelAnnotationImportJobRequest)
                                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Cancels an annotation import job.

Parameters:

cancelAnnotationImportJobRequest -

Returns:

Result of the CancelAnnotationImportJob operation returned by the service.

See Also:

• AWS API Documentation

cancelAnnotationImportJob

default CancelAnnotationImportJobResponse cancelAnnotationImportJob(Consumer<CancelAnnotationImportJobRequest.Builder> cancelAnnotationImportJobRequest)
                                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Cancels an annotation import job.

This is a convenience which creates an instance of the CancelAnnotationImportJobRequest.Builder avoiding the need to create one manually via CancelAnnotationImportJobRequest.builder()

Parameters:

cancelAnnotationImportJobRequest - A Consumer that will call methods on CancelAnnotationImportJobRequest.Builder to create a request.

Returns:

Result of the CancelAnnotationImportJob operation returned by the service.

See Also:

• AWS API Documentation

cancelRun

default CancelRunResponse cancelRun(CancelRunRequest cancelRunRequest)
                             throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Cancels a run.

Parameters:

cancelRunRequest -

Returns:

Result of the CancelRun operation returned by the service.

See Also:

• AWS API Documentation

cancelRun

default CancelRunResponse cancelRun(Consumer<CancelRunRequest.Builder> cancelRunRequest)
                             throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Cancels a run.

This is a convenience which creates an instance of the CancelRunRequest.Builder avoiding the need to create one manually via CancelRunRequest.builder()

Parameters:

cancelRunRequest - A Consumer that will call methods on CancelRunRequest.Builder to create a request.

Returns:

Result of the CancelRun operation returned by the service.

See Also:

• AWS API Documentation

cancelVariantImportJob

default CancelVariantImportJobResponse cancelVariantImportJob(CancelVariantImportJobRequest cancelVariantImportJobRequest)
                                                       throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Cancels a variant import job.

Parameters:

cancelVariantImportJobRequest -

Returns:

Result of the CancelVariantImportJob operation returned by the service.

See Also:

• AWS API Documentation

cancelVariantImportJob

default CancelVariantImportJobResponse cancelVariantImportJob(Consumer<CancelVariantImportJobRequest.Builder> cancelVariantImportJobRequest)
                                                       throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Cancels a variant import job.

This is a convenience which creates an instance of the CancelVariantImportJobRequest.Builder avoiding the need to create one manually via CancelVariantImportJobRequest.builder()

Parameters:

cancelVariantImportJobRequest - A Consumer that will call methods on CancelVariantImportJobRequest.Builder to create a request.

Returns:

Result of the CancelVariantImportJob operation returned by the service.

See Also:

• AWS API Documentation

completeMultipartReadSetUpload

default CompleteMultipartReadSetUploadResponse completeMultipartReadSetUpload(CompleteMultipartReadSetUploadRequest completeMultipartReadSetUploadRequest)
                                                                       throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Concludes a multipart upload once you have uploaded all the components.

Parameters:

completeMultipartReadSetUploadRequest -

Returns:

Result of the CompleteMultipartReadSetUpload operation returned by the service.

See Also:

• AWS API Documentation

completeMultipartReadSetUpload

default CompleteMultipartReadSetUploadResponse completeMultipartReadSetUpload(Consumer<CompleteMultipartReadSetUploadRequest.Builder> completeMultipartReadSetUploadRequest)
                                                                       throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Concludes a multipart upload once you have uploaded all the components.

This is a convenience which creates an instance of the CompleteMultipartReadSetUploadRequest.Builder avoiding the need to create one manually via CompleteMultipartReadSetUploadRequest.builder()

Parameters:

completeMultipartReadSetUploadRequest - A Consumer that will call methods on CompleteMultipartReadSetUploadRequest.Builder to create a request.

Returns:

Result of the CompleteMultipartReadSetUpload operation returned by the service.

See Also:

• AWS API Documentation

createAnnotationStore

default CreateAnnotationStoreResponse createAnnotationStore(CreateAnnotationStoreRequest createAnnotationStoreRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Creates an annotation store.

Parameters:

createAnnotationStoreRequest -

Returns:

Result of the CreateAnnotationStore operation returned by the service.

See Also:

• AWS API Documentation

createAnnotationStore

default CreateAnnotationStoreResponse createAnnotationStore(Consumer<CreateAnnotationStoreRequest.Builder> createAnnotationStoreRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Creates an annotation store.

This is a convenience which creates an instance of the CreateAnnotationStoreRequest.Builder avoiding the need to create one manually via CreateAnnotationStoreRequest.builder()

Parameters:

createAnnotationStoreRequest - A Consumer that will call methods on CreateAnnotationStoreRequest.Builder to create a request.

Returns:

Result of the CreateAnnotationStore operation returned by the service.

See Also:

• AWS API Documentation

createAnnotationStoreVersion

default CreateAnnotationStoreVersionResponse createAnnotationStoreVersion(CreateAnnotationStoreVersionRequest createAnnotationStoreVersionRequest)
                                                                   throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a new version of an annotation store.

Parameters:

createAnnotationStoreVersionRequest -

Returns:

Result of the CreateAnnotationStoreVersion operation returned by the service.

See Also:

• AWS API Documentation

createAnnotationStoreVersion

default CreateAnnotationStoreVersionResponse createAnnotationStoreVersion(Consumer<CreateAnnotationStoreVersionRequest.Builder> createAnnotationStoreVersionRequest)
                                                                   throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a new version of an annotation store.

This is a convenience which creates an instance of the CreateAnnotationStoreVersionRequest.Builder avoiding the need to create one manually via CreateAnnotationStoreVersionRequest.builder()

Parameters:

createAnnotationStoreVersionRequest - A Consumer that will call methods on CreateAnnotationStoreVersionRequest.Builder to create a request.

Returns:

Result of the CreateAnnotationStoreVersion operation returned by the service.

See Also:

• AWS API Documentation

createMultipartReadSetUpload

default CreateMultipartReadSetUploadResponse createMultipartReadSetUpload(CreateMultipartReadSetUploadRequest createMultipartReadSetUploadRequest)
                                                                   throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Begins a multipart read set upload.

Parameters:

createMultipartReadSetUploadRequest -

Returns:

Result of the CreateMultipartReadSetUpload operation returned by the service.

See Also:

• AWS API Documentation

createMultipartReadSetUpload

default CreateMultipartReadSetUploadResponse createMultipartReadSetUpload(Consumer<CreateMultipartReadSetUploadRequest.Builder> createMultipartReadSetUploadRequest)
                                                                   throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Begins a multipart read set upload.

This is a convenience which creates an instance of the CreateMultipartReadSetUploadRequest.Builder avoiding the need to create one manually via CreateMultipartReadSetUploadRequest.builder()

Parameters:

createMultipartReadSetUploadRequest - A Consumer that will call methods on CreateMultipartReadSetUploadRequest.Builder to create a request.

Returns:

Result of the CreateMultipartReadSetUpload operation returned by the service.

See Also:

• AWS API Documentation

createReferenceStore

default CreateReferenceStoreResponse createReferenceStore(CreateReferenceStoreRequest createReferenceStoreRequest)
                                                   throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a reference store.

Parameters:

createReferenceStoreRequest -

Returns:

Result of the CreateReferenceStore operation returned by the service.

See Also:

• AWS API Documentation

createReferenceStore

default CreateReferenceStoreResponse createReferenceStore(Consumer<CreateReferenceStoreRequest.Builder> createReferenceStoreRequest)
                                                   throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a reference store.

This is a convenience which creates an instance of the CreateReferenceStoreRequest.Builder avoiding the need to create one manually via CreateReferenceStoreRequest.builder()

Parameters:

createReferenceStoreRequest - A Consumer that will call methods on CreateReferenceStoreRequest.Builder to create a request.

Returns:

Result of the CreateReferenceStore operation returned by the service.

See Also:

• AWS API Documentation

createRunCache

default CreateRunCacheResponse createRunCache(CreateRunCacheRequest createRunCacheRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

You can create a run cache to save the task outputs from completed tasks in a run for a private workflow. Subsequent runs use the task outputs from the cache, rather than computing the task outputs again. You specify an Amazon S3 location where Amazon Web Services HealthOmics saves the cached data. This data must be immediately accessible (not in an archived state).

For more information, see Creating a run cache in the Amazon Web Services HealthOmics User Guide.

Parameters:

createRunCacheRequest -

Returns:

Result of the CreateRunCache operation returned by the service.

See Also:

• AWS API Documentation

createRunCache

default CreateRunCacheResponse createRunCache(Consumer<CreateRunCacheRequest.Builder> createRunCacheRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

You can create a run cache to save the task outputs from completed tasks in a run for a private workflow. Subsequent runs use the task outputs from the cache, rather than computing the task outputs again. You specify an Amazon S3 location where Amazon Web Services HealthOmics saves the cached data. This data must be immediately accessible (not in an archived state).

For more information, see Creating a run cache in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the CreateRunCacheRequest.Builder avoiding the need to create one manually via CreateRunCacheRequest.builder()

Parameters:

createRunCacheRequest - A Consumer that will call methods on CreateRunCacheRequest.Builder to create a request.

Returns:

Result of the CreateRunCache operation returned by the service.

See Also:

• AWS API Documentation

createRunGroup

default CreateRunGroupResponse createRunGroup(CreateRunGroupRequest createRunGroupRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

You can optionally create a run group to limit the compute resources for the runs that you add to the group.

Parameters:

createRunGroupRequest -

Returns:

Result of the CreateRunGroup operation returned by the service.

See Also:

• AWS API Documentation

createRunGroup

default CreateRunGroupResponse createRunGroup(Consumer<CreateRunGroupRequest.Builder> createRunGroupRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

You can optionally create a run group to limit the compute resources for the runs that you add to the group.

This is a convenience which creates an instance of the CreateRunGroupRequest.Builder avoiding the need to create one manually via CreateRunGroupRequest.builder()

Parameters:

createRunGroupRequest - A Consumer that will call methods on CreateRunGroupRequest.Builder to create a request.

Returns:

Result of the CreateRunGroup operation returned by the service.

See Also:

• AWS API Documentation

createSequenceStore

default CreateSequenceStoreResponse createSequenceStore(CreateSequenceStoreRequest createSequenceStoreRequest)
                                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a sequence store.

Parameters:

createSequenceStoreRequest -

Returns:

Result of the CreateSequenceStore operation returned by the service.

See Also:

• AWS API Documentation

createSequenceStore

default CreateSequenceStoreResponse createSequenceStore(Consumer<CreateSequenceStoreRequest.Builder> createSequenceStoreRequest)
                                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a sequence store.

This is a convenience which creates an instance of the CreateSequenceStoreRequest.Builder avoiding the need to create one manually via CreateSequenceStoreRequest.builder()

Parameters:

createSequenceStoreRequest - A Consumer that will call methods on CreateSequenceStoreRequest.Builder to create a request.

Returns:

Result of the CreateSequenceStore operation returned by the service.

See Also:

• AWS API Documentation

createShare

default CreateShareResponse createShare(CreateShareRequest createShareRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a cross-account shared resource. The resource owner makes an offer to share the resource with the principal subscriber (an AWS user with a different account than the resource owner).

The following resources support cross-account sharing:

• HealthOmics variant stores

• HealthOmics annotation stores

• Private workflows

Parameters:

createShareRequest -

Returns:

Result of the CreateShare operation returned by the service.

See Also:

• AWS API Documentation

createShare

default CreateShareResponse createShare(Consumer<CreateShareRequest.Builder> createShareRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a cross-account shared resource. The resource owner makes an offer to share the resource with the principal subscriber (an AWS user with a different account than the resource owner).

The following resources support cross-account sharing:

• HealthOmics variant stores

• HealthOmics annotation stores

• Private workflows

This is a convenience which creates an instance of the CreateShareRequest.Builder avoiding the need to create one manually via CreateShareRequest.builder()

Parameters:

createShareRequest - A Consumer that will call methods on CreateShareRequest.Builder to create a request.

Returns:

Result of the CreateShare operation returned by the service.

See Also:

• AWS API Documentation

createVariantStore

default CreateVariantStoreResponse createVariantStore(CreateVariantStoreRequest createVariantStoreRequest)
                                               throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a variant store.

Parameters:

createVariantStoreRequest -

Returns:

Result of the CreateVariantStore operation returned by the service.

See Also:

• AWS API Documentation

createVariantStore

default CreateVariantStoreResponse createVariantStore(Consumer<CreateVariantStoreRequest.Builder> createVariantStoreRequest)
                                               throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a variant store.

This is a convenience which creates an instance of the CreateVariantStoreRequest.Builder avoiding the need to create one manually via CreateVariantStoreRequest.builder()

Parameters:

createVariantStoreRequest - A Consumer that will call methods on CreateVariantStoreRequest.Builder to create a request.

Returns:

Result of the CreateVariantStore operation returned by the service.

See Also:

• AWS API Documentation

createWorkflow

default CreateWorkflowResponse createWorkflow(CreateWorkflowRequest createWorkflowRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a private workflow.Private workflows depend on a variety of resources that you create and configure before creating the workflow:

• Input data: Input data for the workflow, stored in an S3 bucket or a Amazon Web Services HealthOmics sequence store.

• Workflow definition files: Define your workflow in one or more workflow definition files, written in WDL, Nextflow, or CWL. The workflow definition specifies the inputs and outputs for runs that use the workflow. It also includes specifications for the runs and run tasks for your workflow, including compute and memory requirements.

• Parameter template files: Define run parameters using a parameter template file (written in JSON).

• ECR container images: Create one or more container images for the workflow. Store the images in a private ECR repository.

• (Optional) Sentieon licenses: Request a Sentieon license if you plan to use Sentieon software in a private workflow.

For more information, see Creating or updating a private workflow in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

Parameters:

createWorkflowRequest -

Returns:

Result of the CreateWorkflow operation returned by the service.

See Also:

• AWS API Documentation

createWorkflow

default CreateWorkflowResponse createWorkflow(Consumer<CreateWorkflowRequest.Builder> createWorkflowRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a private workflow.Private workflows depend on a variety of resources that you create and configure before creating the workflow:

• Input data: Input data for the workflow, stored in an S3 bucket or a Amazon Web Services HealthOmics sequence store.

• Workflow definition files: Define your workflow in one or more workflow definition files, written in WDL, Nextflow, or CWL. The workflow definition specifies the inputs and outputs for runs that use the workflow. It also includes specifications for the runs and run tasks for your workflow, including compute and memory requirements.

• Parameter template files: Define run parameters using a parameter template file (written in JSON).

• ECR container images: Create one or more container images for the workflow. Store the images in a private ECR repository.

• (Optional) Sentieon licenses: Request a Sentieon license if you plan to use Sentieon software in a private workflow.

For more information, see Creating or updating a private workflow in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the CreateWorkflowRequest.Builder avoiding the need to create one manually via CreateWorkflowRequest.builder()

Parameters:

createWorkflowRequest - A Consumer that will call methods on CreateWorkflowRequest.Builder to create a request.

Returns:

Result of the CreateWorkflow operation returned by the service.

See Also:

• AWS API Documentation

createWorkflowVersion

default CreateWorkflowVersionResponse createWorkflowVersion(CreateWorkflowVersionRequest createWorkflowVersionRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a new workflow version for the workflow that you specify with the workflowId parameter.

When you create a new version of a workflow, you need to specify the configuration for the new version. It doesn't inherit any configuration values from the workflow.

Provide a version name that is unique for this workflow. You cannot change the name after HealthOmics creates the version.

Don’t include any personally identifiable information (PII) in the version name. Version names appear in the workflow version ARN.

For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

Parameters:

createWorkflowVersionRequest -

Returns:

Result of the CreateWorkflowVersion operation returned by the service.

See Also:

• AWS API Documentation

createWorkflowVersion

default CreateWorkflowVersionResponse createWorkflowVersion(Consumer<CreateWorkflowVersionRequest.Builder> createWorkflowVersionRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Creates a new workflow version for the workflow that you specify with the workflowId parameter.

When you create a new version of a workflow, you need to specify the configuration for the new version. It doesn't inherit any configuration values from the workflow.

Provide a version name that is unique for this workflow. You cannot change the name after HealthOmics creates the version.

Don’t include any personally identifiable information (PII) in the version name. Version names appear in the workflow version ARN.

For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the CreateWorkflowVersionRequest.Builder avoiding the need to create one manually via CreateWorkflowVersionRequest.builder()

Parameters:

createWorkflowVersionRequest - A Consumer that will call methods on CreateWorkflowVersionRequest.Builder to create a request.

Returns:

Result of the CreateWorkflowVersion operation returned by the service.

See Also:

• AWS API Documentation

deleteAnnotationStore

default DeleteAnnotationStoreResponse deleteAnnotationStore(DeleteAnnotationStoreRequest deleteAnnotationStoreRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes an annotation store.

Parameters:

deleteAnnotationStoreRequest -

Returns:

Result of the DeleteAnnotationStore operation returned by the service.

See Also:

• AWS API Documentation

deleteAnnotationStore

default DeleteAnnotationStoreResponse deleteAnnotationStore(Consumer<DeleteAnnotationStoreRequest.Builder> deleteAnnotationStoreRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes an annotation store.

This is a convenience which creates an instance of the DeleteAnnotationStoreRequest.Builder avoiding the need to create one manually via DeleteAnnotationStoreRequest.builder()

Parameters:

deleteAnnotationStoreRequest - A Consumer that will call methods on DeleteAnnotationStoreRequest.Builder to create a request.

Returns:

Result of the DeleteAnnotationStore operation returned by the service.

See Also:

• AWS API Documentation

deleteAnnotationStoreVersions

default DeleteAnnotationStoreVersionsResponse deleteAnnotationStoreVersions(DeleteAnnotationStoreVersionsRequest deleteAnnotationStoreVersionsRequest)
                                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes one or multiple versions of an annotation store.

Parameters:

deleteAnnotationStoreVersionsRequest -

Returns:

Result of the DeleteAnnotationStoreVersions operation returned by the service.

See Also:

• AWS API Documentation

deleteAnnotationStoreVersions

default DeleteAnnotationStoreVersionsResponse deleteAnnotationStoreVersions(Consumer<DeleteAnnotationStoreVersionsRequest.Builder> deleteAnnotationStoreVersionsRequest)
                                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes one or multiple versions of an annotation store.

This is a convenience which creates an instance of the DeleteAnnotationStoreVersionsRequest.Builder avoiding the need to create one manually via DeleteAnnotationStoreVersionsRequest.builder()

Parameters:

deleteAnnotationStoreVersionsRequest - A Consumer that will call methods on DeleteAnnotationStoreVersionsRequest.Builder to create a request.

Returns:

Result of the DeleteAnnotationStoreVersions operation returned by the service.

See Also:

• AWS API Documentation

deleteReference

default DeleteReferenceResponse deleteReference(DeleteReferenceRequest deleteReferenceRequest)
                                         throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a genome reference.

Parameters:

deleteReferenceRequest -

Returns:

Result of the DeleteReference operation returned by the service.

See Also:

• AWS API Documentation

deleteReference

default DeleteReferenceResponse deleteReference(Consumer<DeleteReferenceRequest.Builder> deleteReferenceRequest)
                                         throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a genome reference.

This is a convenience which creates an instance of the DeleteReferenceRequest.Builder avoiding the need to create one manually via DeleteReferenceRequest.builder()

Parameters:

deleteReferenceRequest - A Consumer that will call methods on DeleteReferenceRequest.Builder to create a request.

Returns:

Result of the DeleteReference operation returned by the service.

See Also:

• AWS API Documentation

deleteReferenceStore

default DeleteReferenceStoreResponse deleteReferenceStore(DeleteReferenceStoreRequest deleteReferenceStoreRequest)
                                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a genome reference store.

Parameters:

deleteReferenceStoreRequest -

Returns:

Result of the DeleteReferenceStore operation returned by the service.

See Also:

• AWS API Documentation

deleteReferenceStore

default DeleteReferenceStoreResponse deleteReferenceStore(Consumer<DeleteReferenceStoreRequest.Builder> deleteReferenceStoreRequest)
                                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a genome reference store.

This is a convenience which creates an instance of the DeleteReferenceStoreRequest.Builder avoiding the need to create one manually via DeleteReferenceStoreRequest.builder()

Parameters:

deleteReferenceStoreRequest - A Consumer that will call methods on DeleteReferenceStoreRequest.Builder to create a request.

Returns:

Result of the DeleteReferenceStore operation returned by the service.

See Also:

• AWS API Documentation

deleteRun

default DeleteRunResponse deleteRun(DeleteRunRequest deleteRunRequest)
                             throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a workflow run.

Parameters:

deleteRunRequest -

Returns:

Result of the DeleteRun operation returned by the service.

See Also:

• AWS API Documentation

deleteRun

default DeleteRunResponse deleteRun(Consumer<DeleteRunRequest.Builder> deleteRunRequest)
                             throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a workflow run.

This is a convenience which creates an instance of the DeleteRunRequest.Builder avoiding the need to create one manually via DeleteRunRequest.builder()

Parameters:

deleteRunRequest - A Consumer that will call methods on DeleteRunRequest.Builder to create a request.

Returns:

Result of the DeleteRun operation returned by the service.

See Also:

• AWS API Documentation

deleteRunCache

default DeleteRunCacheResponse deleteRunCache(DeleteRunCacheRequest deleteRunCacheRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Delete a run cache. This action removes the cache metadata stored in the service account, but doesn't delete the data in Amazon S3. You can access the cache data in Amazon S3, for inspection or to troubleshoot issues. You can remove old cache data using standard S3 Delete operations.

For more information, see Deleting a run cache in the Amazon Web Services HealthOmics User Guide.

Parameters:

deleteRunCacheRequest -

Returns:

Result of the DeleteRunCache operation returned by the service.

See Also:

• AWS API Documentation

deleteRunCache

default DeleteRunCacheResponse deleteRunCache(Consumer<DeleteRunCacheRequest.Builder> deleteRunCacheRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Delete a run cache. This action removes the cache metadata stored in the service account, but doesn't delete the data in Amazon S3. You can access the cache data in Amazon S3, for inspection or to troubleshoot issues. You can remove old cache data using standard S3 Delete operations.

For more information, see Deleting a run cache in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the DeleteRunCacheRequest.Builder avoiding the need to create one manually via DeleteRunCacheRequest.builder()

Parameters:

deleteRunCacheRequest - A Consumer that will call methods on DeleteRunCacheRequest.Builder to create a request.

Returns:

Result of the DeleteRunCache operation returned by the service.

See Also:

• AWS API Documentation

deleteRunGroup

default DeleteRunGroupResponse deleteRunGroup(DeleteRunGroupRequest deleteRunGroupRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a workflow run group.

Parameters:

deleteRunGroupRequest -

Returns:

Result of the DeleteRunGroup operation returned by the service.

See Also:

• AWS API Documentation

deleteRunGroup

default DeleteRunGroupResponse deleteRunGroup(Consumer<DeleteRunGroupRequest.Builder> deleteRunGroupRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a workflow run group.

This is a convenience which creates an instance of the DeleteRunGroupRequest.Builder avoiding the need to create one manually via DeleteRunGroupRequest.builder()

Parameters:

deleteRunGroupRequest - A Consumer that will call methods on DeleteRunGroupRequest.Builder to create a request.

Returns:

Result of the DeleteRunGroup operation returned by the service.

See Also:

• AWS API Documentation

deleteS3AccessPolicy

default DeleteS3AccessPolicyResponse deleteS3AccessPolicy(DeleteS3AccessPolicyRequest deleteS3AccessPolicyRequest)
                                                   throws NotSupportedOperationException,
InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes an access policy for the specified store.

Parameters:

deleteS3AccessPolicyRequest -

Returns:

Result of the DeleteS3AccessPolicy operation returned by the service.

See Also:

• AWS API Documentation

deleteS3AccessPolicy

default DeleteS3AccessPolicyResponse deleteS3AccessPolicy(Consumer<DeleteS3AccessPolicyRequest.Builder> deleteS3AccessPolicyRequest)
                                                   throws NotSupportedOperationException,
InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes an access policy for the specified store.

This is a convenience which creates an instance of the DeleteS3AccessPolicyRequest.Builder avoiding the need to create one manually via DeleteS3AccessPolicyRequest.builder()

Parameters:

deleteS3AccessPolicyRequest - A Consumer that will call methods on DeleteS3AccessPolicyRequest.Builder to create a request.

Returns:

Result of the DeleteS3AccessPolicy operation returned by the service.

See Also:

• AWS API Documentation

deleteSequenceStore

default DeleteSequenceStoreResponse deleteSequenceStore(DeleteSequenceStoreRequest deleteSequenceStoreRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a sequence store.

Parameters:

deleteSequenceStoreRequest -

Returns:

Result of the DeleteSequenceStore operation returned by the service.

See Also:

• AWS API Documentation

deleteSequenceStore

default DeleteSequenceStoreResponse deleteSequenceStore(Consumer<DeleteSequenceStoreRequest.Builder> deleteSequenceStoreRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a sequence store.

This is a convenience which creates an instance of the DeleteSequenceStoreRequest.Builder avoiding the need to create one manually via DeleteSequenceStoreRequest.builder()

Parameters:

deleteSequenceStoreRequest - A Consumer that will call methods on DeleteSequenceStoreRequest.Builder to create a request.

Returns:

Result of the DeleteSequenceStore operation returned by the service.

See Also:

• AWS API Documentation

deleteShare

default DeleteShareResponse deleteShare(DeleteShareRequest deleteShareRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a resource share. If you are the resource owner, the subscriber will no longer have access to the shared resource. If you are the subscriber, this operation deletes your access to the share.

Parameters:

deleteShareRequest -

Returns:

Result of the DeleteShare operation returned by the service.

See Also:

• AWS API Documentation

deleteShare

default DeleteShareResponse deleteShare(Consumer<DeleteShareRequest.Builder> deleteShareRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a resource share. If you are the resource owner, the subscriber will no longer have access to the shared resource. If you are the subscriber, this operation deletes your access to the share.

This is a convenience which creates an instance of the DeleteShareRequest.Builder avoiding the need to create one manually via DeleteShareRequest.builder()

Parameters:

deleteShareRequest - A Consumer that will call methods on DeleteShareRequest.Builder to create a request.

Returns:

Result of the DeleteShare operation returned by the service.

See Also:

• AWS API Documentation

deleteVariantStore

default DeleteVariantStoreResponse deleteVariantStore(DeleteVariantStoreRequest deleteVariantStoreRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a variant store.

Parameters:

deleteVariantStoreRequest -

Returns:

Result of the DeleteVariantStore operation returned by the service.

See Also:

• AWS API Documentation

deleteVariantStore

default DeleteVariantStoreResponse deleteVariantStore(Consumer<DeleteVariantStoreRequest.Builder> deleteVariantStoreRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a variant store.

This is a convenience which creates an instance of the DeleteVariantStoreRequest.Builder avoiding the need to create one manually via DeleteVariantStoreRequest.builder()

Parameters:

deleteVariantStoreRequest - A Consumer that will call methods on DeleteVariantStoreRequest.Builder to create a request.

Returns:

Result of the DeleteVariantStore operation returned by the service.

See Also:

• AWS API Documentation

deleteWorkflow

default DeleteWorkflowResponse deleteWorkflow(DeleteWorkflowRequest deleteWorkflowRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a workflow.

Parameters:

deleteWorkflowRequest -

Returns:

Result of the DeleteWorkflow operation returned by the service.

See Also:

• AWS API Documentation

deleteWorkflow

default DeleteWorkflowResponse deleteWorkflow(Consumer<DeleteWorkflowRequest.Builder> deleteWorkflowRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a workflow.

This is a convenience which creates an instance of the DeleteWorkflowRequest.Builder avoiding the need to create one manually via DeleteWorkflowRequest.builder()

Parameters:

deleteWorkflowRequest - A Consumer that will call methods on DeleteWorkflowRequest.Builder to create a request.

Returns:

Result of the DeleteWorkflow operation returned by the service.

See Also:

• AWS API Documentation

deleteWorkflowVersion

default DeleteWorkflowVersionResponse deleteWorkflowVersion(DeleteWorkflowVersionRequest deleteWorkflowVersionRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a workflow version. Deleting a workflow version doesn't affect any ongoing runs that are using the workflow version.

For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

Parameters:

deleteWorkflowVersionRequest -

Returns:

Result of the DeleteWorkflowVersion operation returned by the service.

See Also:

• AWS API Documentation

deleteWorkflowVersion

default DeleteWorkflowVersionResponse deleteWorkflowVersion(Consumer<DeleteWorkflowVersionRequest.Builder> deleteWorkflowVersionRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Deletes a workflow version. Deleting a workflow version doesn't affect any ongoing runs that are using the workflow version.

For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the DeleteWorkflowVersionRequest.Builder avoiding the need to create one manually via DeleteWorkflowVersionRequest.builder()

Parameters:

deleteWorkflowVersionRequest - A Consumer that will call methods on DeleteWorkflowVersionRequest.Builder to create a request.

Returns:

Result of the DeleteWorkflowVersion operation returned by the service.

See Also:

• AWS API Documentation

getAnnotationImportJob

default GetAnnotationImportJobResponse getAnnotationImportJob(GetAnnotationImportJobRequest getAnnotationImportJobRequest)
                                                       throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about an annotation import job.

Parameters:

getAnnotationImportJobRequest -

Returns:

Result of the GetAnnotationImportJob operation returned by the service.

See Also:

• AWS API Documentation

getAnnotationImportJob

default GetAnnotationImportJobResponse getAnnotationImportJob(Consumer<GetAnnotationImportJobRequest.Builder> getAnnotationImportJobRequest)
                                                       throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about an annotation import job.

This is a convenience which creates an instance of the GetAnnotationImportJobRequest.Builder avoiding the need to create one manually via GetAnnotationImportJobRequest.builder()

Parameters:

getAnnotationImportJobRequest - A Consumer that will call methods on GetAnnotationImportJobRequest.Builder to create a request.

Returns:

Result of the GetAnnotationImportJob operation returned by the service.

See Also:

• AWS API Documentation

getAnnotationStore

default GetAnnotationStoreResponse getAnnotationStore(GetAnnotationStoreRequest getAnnotationStoreRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about an annotation store.

Parameters:

getAnnotationStoreRequest -

Returns:

Result of the GetAnnotationStore operation returned by the service.

See Also:

• AWS API Documentation

getAnnotationStore

default GetAnnotationStoreResponse getAnnotationStore(Consumer<GetAnnotationStoreRequest.Builder> getAnnotationStoreRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about an annotation store.

This is a convenience which creates an instance of the GetAnnotationStoreRequest.Builder avoiding the need to create one manually via GetAnnotationStoreRequest.builder()

Parameters:

getAnnotationStoreRequest - A Consumer that will call methods on GetAnnotationStoreRequest.Builder to create a request.

Returns:

Result of the GetAnnotationStore operation returned by the service.

See Also:

• AWS API Documentation

getAnnotationStoreVersion

default GetAnnotationStoreVersionResponse getAnnotationStoreVersion(GetAnnotationStoreVersionRequest getAnnotationStoreVersionRequest)
                                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves the metadata for an annotation store version.

Parameters:

getAnnotationStoreVersionRequest -

Returns:

Result of the GetAnnotationStoreVersion operation returned by the service.

See Also:

• AWS API Documentation

getAnnotationStoreVersion

default GetAnnotationStoreVersionResponse getAnnotationStoreVersion(Consumer<GetAnnotationStoreVersionRequest.Builder> getAnnotationStoreVersionRequest)
                                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves the metadata for an annotation store version.

This is a convenience which creates an instance of the GetAnnotationStoreVersionRequest.Builder avoiding the need to create one manually via GetAnnotationStoreVersionRequest.builder()

Parameters:

getAnnotationStoreVersionRequest - A Consumer that will call methods on GetAnnotationStoreVersionRequest.Builder to create a request.

Returns:

Result of the GetAnnotationStoreVersion operation returned by the service.

See Also:

• AWS API Documentation

getReadSet

default <ReturnT> ReturnT getReadSet(GetReadSetRequest getReadSetRequest,
 ResponseTransformer<GetReadSetResponse,ReturnT> responseTransformer)
                              throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a file from a read set.

Parameters:

getReadSetRequest -

responseTransformer - Functional interface for processing the streamed response content. The unmarshalled GetReadSetResponse and an InputStream to the response content are provided as parameters to the callback. The callback may return a transformed type which will be the return value of this method. See ResponseTransformer for details on implementing this interface and for links to pre-canned implementations for common scenarios like downloading to a file. The service documentation for the response content is as follows '

The read set file payload.

'.

Returns:

The transformed result of the ResponseTransformer.

See Also:

• AWS API Documentation

getReadSet

default <ReturnT> ReturnT getReadSet(Consumer<GetReadSetRequest.Builder> getReadSetRequest,
 ResponseTransformer<GetReadSetResponse,ReturnT> responseTransformer)
                              throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a file from a read set.

This is a convenience which creates an instance of the GetReadSetRequest.Builder avoiding the need to create one manually via GetReadSetRequest.builder()

Parameters:

getReadSetRequest - A Consumer that will call methods on GetReadSetRequest.Builder to create a request.

responseTransformer - Functional interface for processing the streamed response content. The unmarshalled GetReadSetResponse and an InputStream to the response content are provided as parameters to the callback. The callback may return a transformed type which will be the return value of this method. See ResponseTransformer for details on implementing this interface and for links to pre-canned implementations for common scenarios like downloading to a file. The service documentation for the response content is as follows '

The read set file payload.

'.

Returns:

The transformed result of the ResponseTransformer.

See Also:

• AWS API Documentation

getReadSet

default GetReadSetResponse getReadSet(GetReadSetRequest getReadSetRequest,
 Path destinationPath)
                               throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a file from a read set.

Parameters:

getReadSetRequest -

destinationPath - Path to file that response contents will be written to. The file must not exist or this method will throw an exception. If the file is not writable by the current user then an exception will be thrown. The service documentation for the response content is as follows '

The read set file payload.

'.

Returns:

The transformed result of the ResponseTransformer.

See Also:

• getReadSet(GetReadSetRequest, ResponseTransformer)
• AWS API Documentation

getReadSet

default GetReadSetResponse getReadSet(Consumer<GetReadSetRequest.Builder> getReadSetRequest,
 Path destinationPath)
                               throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a file from a read set.

This is a convenience which creates an instance of the GetReadSetRequest.Builder avoiding the need to create one manually via GetReadSetRequest.builder()

Parameters:

getReadSetRequest - A Consumer that will call methods on GetReadSetRequest.Builder to create a request.

destinationPath - Path to file that response contents will be written to. The file must not exist or this method will throw an exception. If the file is not writable by the current user then an exception will be thrown. The service documentation for the response content is as follows '

The read set file payload.

'.

Returns:

The transformed result of the ResponseTransformer.

See Also:

• getReadSet(GetReadSetRequest, ResponseTransformer)
• AWS API Documentation

getReadSet

default ResponseInputStream<GetReadSetResponse> getReadSet(GetReadSetRequest getReadSetRequest)
                                                    throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a file from a read set.

Parameters:

getReadSetRequest -

Returns:

A ResponseInputStream containing data streamed from service. Note that this is an unmanaged reference to the underlying HTTP connection so great care must be taken to ensure all data if fully read from the input stream and that it is properly closed. Failure to do so may result in sub-optimal behavior and exhausting connections in the connection pool. The unmarshalled response object can be obtained via ResponseInputStream.response(). The service documentation for the response content is as follows '

The read set file payload.

'.

See Also:

• invalid reference

  #getObject(getReadSet, ResponseTransformer)

• AWS API Documentation

getReadSet

default ResponseInputStream<GetReadSetResponse> getReadSet(Consumer<GetReadSetRequest.Builder> getReadSetRequest)
                                                    throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a file from a read set.

This is a convenience which creates an instance of the GetReadSetRequest.Builder avoiding the need to create one manually via GetReadSetRequest.builder()

Parameters:

getReadSetRequest - A Consumer that will call methods on GetReadSetRequest.Builder to create a request.

Returns:

A ResponseInputStream containing data streamed from service. Note that this is an unmanaged reference to the underlying HTTP connection so great care must be taken to ensure all data if fully read from the input stream and that it is properly closed. Failure to do so may result in sub-optimal behavior and exhausting connections in the connection pool. The unmarshalled response object can be obtained via ResponseInputStream.response(). The service documentation for the response content is as follows '

The read set file payload.

'.

See Also:

• invalid reference

  #getObject(getReadSet, ResponseTransformer)

• AWS API Documentation

getReadSetAsBytes

default ResponseBytes<GetReadSetResponse> getReadSetAsBytes(GetReadSetRequest getReadSetRequest)
                                                     throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a file from a read set.

Parameters:

getReadSetRequest -

Returns:

A ResponseBytes that loads the data streamed from the service into memory and exposes it in convenient in-memory representations like a byte buffer or string. The unmarshalled response object can be obtained via ResponseBytes.response(). The service documentation for the response content is as follows '

The read set file payload.

'.

See Also:

• invalid reference

  #getObject(getReadSet, ResponseTransformer)

• AWS API Documentation

getReadSetAsBytes

default ResponseBytes<GetReadSetResponse> getReadSetAsBytes(Consumer<GetReadSetRequest.Builder> getReadSetRequest)
                                                     throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a file from a read set.

This is a convenience which creates an instance of the GetReadSetRequest.Builder avoiding the need to create one manually via GetReadSetRequest.builder()

Parameters:

getReadSetRequest - A Consumer that will call methods on GetReadSetRequest.Builder to create a request.

Returns:

A ResponseBytes that loads the data streamed from the service into memory and exposes it in convenient in-memory representations like a byte buffer or string. The unmarshalled response object can be obtained via ResponseBytes.response(). The service documentation for the response content is as follows '

The read set file payload.

'.

See Also:

• invalid reference

  #getObject(getReadSet, ResponseTransformer)

• AWS API Documentation

getReadSetActivationJob

default GetReadSetActivationJobResponse getReadSetActivationJob(GetReadSetActivationJobRequest getReadSetActivationJobRequest)
                                                         throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a read set activation job.

Parameters:

getReadSetActivationJobRequest -

Returns:

Result of the GetReadSetActivationJob operation returned by the service.

See Also:

• AWS API Documentation

getReadSetActivationJob

default GetReadSetActivationJobResponse getReadSetActivationJob(Consumer<GetReadSetActivationJobRequest.Builder> getReadSetActivationJobRequest)
                                                         throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a read set activation job.

This is a convenience which creates an instance of the GetReadSetActivationJobRequest.Builder avoiding the need to create one manually via GetReadSetActivationJobRequest.builder()

Parameters:

getReadSetActivationJobRequest - A Consumer that will call methods on GetReadSetActivationJobRequest.Builder to create a request.

Returns:

Result of the GetReadSetActivationJob operation returned by the service.

See Also:

• AWS API Documentation

getReadSetExportJob

default GetReadSetExportJobResponse getReadSetExportJob(GetReadSetExportJobRequest getReadSetExportJobRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a read set export job.

Parameters:

getReadSetExportJobRequest -

Returns:

Result of the GetReadSetExportJob operation returned by the service.

See Also:

• AWS API Documentation

getReadSetExportJob

default GetReadSetExportJobResponse getReadSetExportJob(Consumer<GetReadSetExportJobRequest.Builder> getReadSetExportJobRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a read set export job.

This is a convenience which creates an instance of the GetReadSetExportJobRequest.Builder avoiding the need to create one manually via GetReadSetExportJobRequest.builder()

Parameters:

getReadSetExportJobRequest - A Consumer that will call methods on GetReadSetExportJobRequest.Builder to create a request.

Returns:

Result of the GetReadSetExportJob operation returned by the service.

See Also:

• AWS API Documentation

getReadSetImportJob

default GetReadSetImportJobResponse getReadSetImportJob(GetReadSetImportJobRequest getReadSetImportJobRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a read set import job.

Parameters:

getReadSetImportJobRequest -

Returns:

Result of the GetReadSetImportJob operation returned by the service.

See Also:

• AWS API Documentation

getReadSetImportJob

default GetReadSetImportJobResponse getReadSetImportJob(Consumer<GetReadSetImportJobRequest.Builder> getReadSetImportJobRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a read set import job.

This is a convenience which creates an instance of the GetReadSetImportJobRequest.Builder avoiding the need to create one manually via GetReadSetImportJobRequest.builder()

Parameters:

getReadSetImportJobRequest - A Consumer that will call methods on GetReadSetImportJobRequest.Builder to create a request.

Returns:

Result of the GetReadSetImportJob operation returned by the service.

See Also:

• AWS API Documentation

getReadSetMetadata

default GetReadSetMetadataResponse getReadSetMetadata(GetReadSetMetadataRequest getReadSetMetadataRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets details about a read set.

Parameters:

getReadSetMetadataRequest -

Returns:

Result of the GetReadSetMetadata operation returned by the service.

See Also:

• AWS API Documentation

getReadSetMetadata

default GetReadSetMetadataResponse getReadSetMetadata(Consumer<GetReadSetMetadataRequest.Builder> getReadSetMetadataRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets details about a read set.

This is a convenience which creates an instance of the GetReadSetMetadataRequest.Builder avoiding the need to create one manually via GetReadSetMetadataRequest.builder()

Parameters:

getReadSetMetadataRequest - A Consumer that will call methods on GetReadSetMetadataRequest.Builder to create a request.

Returns:

Result of the GetReadSetMetadata operation returned by the service.

See Also:

• AWS API Documentation

getReference

default <ReturnT> ReturnT getReference(GetReferenceRequest getReferenceRequest,
 ResponseTransformer<GetReferenceResponse,ReturnT> responseTransformer)
                                throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a reference file.

Parameters:

getReferenceRequest -

responseTransformer - Functional interface for processing the streamed response content. The unmarshalled GetReferenceResponse and an InputStream to the response content are provided as parameters to the callback. The callback may return a transformed type which will be the return value of this method. See ResponseTransformer for details on implementing this interface and for links to pre-canned implementations for common scenarios like downloading to a file. The service documentation for the response content is as follows '

The reference file payload.

'.

Returns:

The transformed result of the ResponseTransformer.

See Also:

• AWS API Documentation

getReference

default <ReturnT> ReturnT getReference(Consumer<GetReferenceRequest.Builder> getReferenceRequest,
 ResponseTransformer<GetReferenceResponse,ReturnT> responseTransformer)
                                throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a reference file.

This is a convenience which creates an instance of the GetReferenceRequest.Builder avoiding the need to create one manually via GetReferenceRequest.builder()

Parameters:

getReferenceRequest - A Consumer that will call methods on GetReferenceRequest.Builder to create a request.

responseTransformer - Functional interface for processing the streamed response content. The unmarshalled GetReferenceResponse and an InputStream to the response content are provided as parameters to the callback. The callback may return a transformed type which will be the return value of this method. See ResponseTransformer for details on implementing this interface and for links to pre-canned implementations for common scenarios like downloading to a file. The service documentation for the response content is as follows '

The reference file payload.

'.

Returns:

The transformed result of the ResponseTransformer.

See Also:

• AWS API Documentation

getReference

default GetReferenceResponse getReference(GetReferenceRequest getReferenceRequest,
 Path destinationPath)
                                   throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a reference file.

Parameters:

getReferenceRequest -

destinationPath - Path to file that response contents will be written to. The file must not exist or this method will throw an exception. If the file is not writable by the current user then an exception will be thrown. The service documentation for the response content is as follows '

The reference file payload.

'.

Returns:

The transformed result of the ResponseTransformer.

See Also:

• getReference(GetReferenceRequest, ResponseTransformer)
• AWS API Documentation

getReference

default GetReferenceResponse getReference(Consumer<GetReferenceRequest.Builder> getReferenceRequest,
 Path destinationPath)
                                   throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a reference file.

This is a convenience which creates an instance of the GetReferenceRequest.Builder avoiding the need to create one manually via GetReferenceRequest.builder()

Parameters:

getReferenceRequest - A Consumer that will call methods on GetReferenceRequest.Builder to create a request.

destinationPath - Path to file that response contents will be written to. The file must not exist or this method will throw an exception. If the file is not writable by the current user then an exception will be thrown. The service documentation for the response content is as follows '

The reference file payload.

'.

Returns:

The transformed result of the ResponseTransformer.

See Also:

• getReference(GetReferenceRequest, ResponseTransformer)
• AWS API Documentation

getReference

default ResponseInputStream<GetReferenceResponse> getReference(GetReferenceRequest getReferenceRequest)
                                                        throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a reference file.

Parameters:

getReferenceRequest -

Returns:

A ResponseInputStream containing data streamed from service. Note that this is an unmanaged reference to the underlying HTTP connection so great care must be taken to ensure all data if fully read from the input stream and that it is properly closed. Failure to do so may result in sub-optimal behavior and exhausting connections in the connection pool. The unmarshalled response object can be obtained via ResponseInputStream.response(). The service documentation for the response content is as follows '

The reference file payload.

'.

See Also:

• invalid reference

  #getObject(getReference, ResponseTransformer)

• AWS API Documentation

getReference

default ResponseInputStream<GetReferenceResponse> getReference(Consumer<GetReferenceRequest.Builder> getReferenceRequest)
                                                        throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a reference file.

This is a convenience which creates an instance of the GetReferenceRequest.Builder avoiding the need to create one manually via GetReferenceRequest.builder()

Parameters:

getReferenceRequest - A Consumer that will call methods on GetReferenceRequest.Builder to create a request.

Returns:

A ResponseInputStream containing data streamed from service. Note that this is an unmanaged reference to the underlying HTTP connection so great care must be taken to ensure all data if fully read from the input stream and that it is properly closed. Failure to do so may result in sub-optimal behavior and exhausting connections in the connection pool. The unmarshalled response object can be obtained via ResponseInputStream.response(). The service documentation for the response content is as follows '

The reference file payload.

'.

See Also:

• invalid reference

  #getObject(getReference, ResponseTransformer)

• AWS API Documentation

getReferenceAsBytes

default ResponseBytes<GetReferenceResponse> getReferenceAsBytes(GetReferenceRequest getReferenceRequest)
                                                         throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a reference file.

Parameters:

getReferenceRequest -

Returns:

A ResponseBytes that loads the data streamed from the service into memory and exposes it in convenient in-memory representations like a byte buffer or string. The unmarshalled response object can be obtained via ResponseBytes.response(). The service documentation for the response content is as follows '

The reference file payload.

'.

See Also:

• invalid reference

  #getObject(getReference, ResponseTransformer)

• AWS API Documentation

getReferenceAsBytes

default ResponseBytes<GetReferenceResponse> getReferenceAsBytes(Consumer<GetReferenceRequest.Builder> getReferenceRequest)
                                                         throws InternalServerException,
RangeNotSatisfiableException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets a reference file.

This is a convenience which creates an instance of the GetReferenceRequest.Builder avoiding the need to create one manually via GetReferenceRequest.builder()

Parameters:

getReferenceRequest - A Consumer that will call methods on GetReferenceRequest.Builder to create a request.

Returns:

A ResponseBytes that loads the data streamed from the service into memory and exposes it in convenient in-memory representations like a byte buffer or string. The unmarshalled response object can be obtained via ResponseBytes.response(). The service documentation for the response content is as follows '

The reference file payload.

'.

See Also:

• invalid reference

  #getObject(getReference, ResponseTransformer)

• AWS API Documentation

getReferenceImportJob

default GetReferenceImportJobResponse getReferenceImportJob(GetReferenceImportJobRequest getReferenceImportJobRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a reference import job.

Parameters:

getReferenceImportJobRequest -

Returns:

Result of the GetReferenceImportJob operation returned by the service.

See Also:

• AWS API Documentation

getReferenceImportJob

default GetReferenceImportJobResponse getReferenceImportJob(Consumer<GetReferenceImportJobRequest.Builder> getReferenceImportJobRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a reference import job.

This is a convenience which creates an instance of the GetReferenceImportJobRequest.Builder avoiding the need to create one manually via GetReferenceImportJobRequest.builder()

Parameters:

getReferenceImportJobRequest - A Consumer that will call methods on GetReferenceImportJobRequest.Builder to create a request.

Returns:

Result of the GetReferenceImportJob operation returned by the service.

See Also:

• AWS API Documentation

getReferenceMetadata

default GetReferenceMetadataResponse getReferenceMetadata(GetReferenceMetadataRequest getReferenceMetadataRequest)
                                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a genome reference's metadata.

Parameters:

getReferenceMetadataRequest -

Returns:

Result of the GetReferenceMetadata operation returned by the service.

See Also:

• AWS API Documentation

getReferenceMetadata

default GetReferenceMetadataResponse getReferenceMetadata(Consumer<GetReferenceMetadataRequest.Builder> getReferenceMetadataRequest)
                                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a genome reference's metadata.

This is a convenience which creates an instance of the GetReferenceMetadataRequest.Builder avoiding the need to create one manually via GetReferenceMetadataRequest.builder()

Parameters:

getReferenceMetadataRequest - A Consumer that will call methods on GetReferenceMetadataRequest.Builder to create a request.

Returns:

Result of the GetReferenceMetadata operation returned by the service.

See Also:

• AWS API Documentation

getReferenceStore

default GetReferenceStoreResponse getReferenceStore(GetReferenceStoreRequest getReferenceStoreRequest)
                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a reference store.

Parameters:

getReferenceStoreRequest -

Returns:

Result of the GetReferenceStore operation returned by the service.

See Also:

• AWS API Documentation

getReferenceStore

default GetReferenceStoreResponse getReferenceStore(Consumer<GetReferenceStoreRequest.Builder> getReferenceStoreRequest)
                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a reference store.

This is a convenience which creates an instance of the GetReferenceStoreRequest.Builder avoiding the need to create one manually via GetReferenceStoreRequest.builder()

Parameters:

getReferenceStoreRequest - A Consumer that will call methods on GetReferenceStoreRequest.Builder to create a request.

Returns:

Result of the GetReferenceStore operation returned by the service.

See Also:

• AWS API Documentation

getRun

default GetRunResponse getRun(GetRunRequest getRunRequest)
                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow run.

If a workflow is shared with you, you cannot export information about the run.

Amazon Web Services HealthOmics stores a fixed number of runs that are available to the console and API. If GetRun doesn't return the requested run, you can find run logs for all runs in the CloudWatch logs. For more information about viewing the run logs, see CloudWatch logs in the in the Amazon Web Services HealthOmics User Guide.

Parameters:

getRunRequest -

Returns:

Result of the GetRun operation returned by the service.

See Also:

• AWS API Documentation

getRun

default GetRunResponse getRun(Consumer<GetRunRequest.Builder> getRunRequest)
                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow run.

If a workflow is shared with you, you cannot export information about the run.

Amazon Web Services HealthOmics stores a fixed number of runs that are available to the console and API. If GetRun doesn't return the requested run, you can find run logs for all runs in the CloudWatch logs. For more information about viewing the run logs, see CloudWatch logs in the in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the GetRunRequest.Builder avoiding the need to create one manually via GetRunRequest.builder()

Parameters:

getRunRequest - A Consumer that will call methods on GetRunRequest.Builder to create a request.

Returns:

Result of the GetRun operation returned by the service.

See Also:

• AWS API Documentation

getRunCache

default GetRunCacheResponse getRunCache(GetRunCacheRequest getRunCacheRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieve the details for the specified run cache.

For more information, see Call caching for Amazon Web Services HealthOmics runs in the Amazon Web Services HealthOmics User Guide.

Parameters:

getRunCacheRequest -

Returns:

Result of the GetRunCache operation returned by the service.

See Also:

• AWS API Documentation

getRunCache

default GetRunCacheResponse getRunCache(Consumer<GetRunCacheRequest.Builder> getRunCacheRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieve the details for the specified run cache.

For more information, see Call caching for Amazon Web Services HealthOmics runs in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the GetRunCacheRequest.Builder avoiding the need to create one manually via GetRunCacheRequest.builder()

Parameters:

getRunCacheRequest - A Consumer that will call methods on GetRunCacheRequest.Builder to create a request.

Returns:

Result of the GetRunCache operation returned by the service.

See Also:

• AWS API Documentation

getRunGroup

default GetRunGroupResponse getRunGroup(GetRunGroupRequest getRunGroupRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow run group.

Parameters:

getRunGroupRequest -

Returns:

Result of the GetRunGroup operation returned by the service.

See Also:

• AWS API Documentation

getRunGroup

default GetRunGroupResponse getRunGroup(Consumer<GetRunGroupRequest.Builder> getRunGroupRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow run group.

This is a convenience which creates an instance of the GetRunGroupRequest.Builder avoiding the need to create one manually via GetRunGroupRequest.builder()

Parameters:

getRunGroupRequest - A Consumer that will call methods on GetRunGroupRequest.Builder to create a request.

Returns:

Result of the GetRunGroup operation returned by the service.

See Also:

• AWS API Documentation

getRunTask

default GetRunTaskResponse getRunTask(GetRunTaskRequest getRunTaskRequest)
                               throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow run task.

Parameters:

getRunTaskRequest -

Returns:

Result of the GetRunTask operation returned by the service.

See Also:

• AWS API Documentation

getRunTask

default GetRunTaskResponse getRunTask(Consumer<GetRunTaskRequest.Builder> getRunTaskRequest)
                               throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow run task.

This is a convenience which creates an instance of the GetRunTaskRequest.Builder avoiding the need to create one manually via GetRunTaskRequest.builder()

Parameters:

getRunTaskRequest - A Consumer that will call methods on GetRunTaskRequest.Builder to create a request.

Returns:

Result of the GetRunTask operation returned by the service.

See Also:

• AWS API Documentation

getS3AccessPolicy

default GetS3AccessPolicyResponse getS3AccessPolicy(GetS3AccessPolicyRequest getS3AccessPolicyRequest)
                                             throws NotSupportedOperationException,
InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves details about an access policy on a given store.

Parameters:

getS3AccessPolicyRequest -

Returns:

Result of the GetS3AccessPolicy operation returned by the service.

See Also:

• AWS API Documentation

getS3AccessPolicy

default GetS3AccessPolicyResponse getS3AccessPolicy(Consumer<GetS3AccessPolicyRequest.Builder> getS3AccessPolicyRequest)
                                             throws NotSupportedOperationException,
InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves details about an access policy on a given store.

This is a convenience which creates an instance of the GetS3AccessPolicyRequest.Builder avoiding the need to create one manually via GetS3AccessPolicyRequest.builder()

Parameters:

getS3AccessPolicyRequest - A Consumer that will call methods on GetS3AccessPolicyRequest.Builder to create a request.

Returns:

Result of the GetS3AccessPolicy operation returned by the service.

See Also:

• AWS API Documentation

getSequenceStore

default GetSequenceStoreResponse getSequenceStore(GetSequenceStoreRequest getSequenceStoreRequest)
                                           throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a sequence store.

Parameters:

getSequenceStoreRequest -

Returns:

Result of the GetSequenceStore operation returned by the service.

See Also:

• AWS API Documentation

getSequenceStore

default GetSequenceStoreResponse getSequenceStore(Consumer<GetSequenceStoreRequest.Builder> getSequenceStoreRequest)
                                           throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a sequence store.

This is a convenience which creates an instance of the GetSequenceStoreRequest.Builder avoiding the need to create one manually via GetSequenceStoreRequest.builder()

Parameters:

getSequenceStoreRequest - A Consumer that will call methods on GetSequenceStoreRequest.Builder to create a request.

Returns:

Result of the GetSequenceStore operation returned by the service.

See Also:

• AWS API Documentation

getShare

default GetShareResponse getShare(GetShareRequest getShareRequest)
                           throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves the metadata for the specified resource share.

Parameters:

getShareRequest -

Returns:

Result of the GetShare operation returned by the service.

See Also:

• AWS API Documentation

getShare

default GetShareResponse getShare(Consumer<GetShareRequest.Builder> getShareRequest)
                           throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves the metadata for the specified resource share.

This is a convenience which creates an instance of the GetShareRequest.Builder avoiding the need to create one manually via GetShareRequest.builder()

Parameters:

getShareRequest - A Consumer that will call methods on GetShareRequest.Builder to create a request.

Returns:

Result of the GetShare operation returned by the service.

See Also:

• AWS API Documentation

getVariantImportJob

default GetVariantImportJobResponse getVariantImportJob(GetVariantImportJobRequest getVariantImportJobRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a variant import job.

Parameters:

getVariantImportJobRequest -

Returns:

Result of the GetVariantImportJob operation returned by the service.

See Also:

• AWS API Documentation

getVariantImportJob

default GetVariantImportJobResponse getVariantImportJob(Consumer<GetVariantImportJobRequest.Builder> getVariantImportJobRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a variant import job.

This is a convenience which creates an instance of the GetVariantImportJobRequest.Builder avoiding the need to create one manually via GetVariantImportJobRequest.builder()

Parameters:

getVariantImportJobRequest - A Consumer that will call methods on GetVariantImportJobRequest.Builder to create a request.

Returns:

Result of the GetVariantImportJob operation returned by the service.

See Also:

• AWS API Documentation

getVariantStore

default GetVariantStoreResponse getVariantStore(GetVariantStoreRequest getVariantStoreRequest)
                                         throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a variant store.

Parameters:

getVariantStoreRequest -

Returns:

Result of the GetVariantStore operation returned by the service.

See Also:

• AWS API Documentation

getVariantStore

default GetVariantStoreResponse getVariantStore(Consumer<GetVariantStoreRequest.Builder> getVariantStoreRequest)
                                         throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a variant store.

This is a convenience which creates an instance of the GetVariantStoreRequest.Builder avoiding the need to create one manually via GetVariantStoreRequest.builder()

Parameters:

getVariantStoreRequest - A Consumer that will call methods on GetVariantStoreRequest.Builder to create a request.

Returns:

Result of the GetVariantStore operation returned by the service.

See Also:

• AWS API Documentation

getWorkflow

default GetWorkflowResponse getWorkflow(GetWorkflowRequest getWorkflowRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow.

If a workflow is shared with you, you cannot export the workflow.

Parameters:

getWorkflowRequest -

Returns:

Result of the GetWorkflow operation returned by the service.

See Also:

• AWS API Documentation

getWorkflow

default GetWorkflowResponse getWorkflow(Consumer<GetWorkflowRequest.Builder> getWorkflowRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow.

If a workflow is shared with you, you cannot export the workflow.

This is a convenience which creates an instance of the GetWorkflowRequest.Builder avoiding the need to create one manually via GetWorkflowRequest.builder()

Parameters:

getWorkflowRequest - A Consumer that will call methods on GetWorkflowRequest.Builder to create a request.

Returns:

Result of the GetWorkflow operation returned by the service.

See Also:

• AWS API Documentation

getWorkflowVersion

default GetWorkflowVersionResponse getWorkflowVersion(GetWorkflowVersionRequest getWorkflowVersionRequest)
                                               throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow version. For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

Parameters:

getWorkflowVersionRequest -

Returns:

Result of the GetWorkflowVersion operation returned by the service.

See Also:

• AWS API Documentation

getWorkflowVersion

default GetWorkflowVersionResponse getWorkflowVersion(Consumer<GetWorkflowVersionRequest.Builder> getWorkflowVersionRequest)
                                               throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Gets information about a workflow version. For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the GetWorkflowVersionRequest.Builder avoiding the need to create one manually via GetWorkflowVersionRequest.builder()

Parameters:

getWorkflowVersionRequest - A Consumer that will call methods on GetWorkflowVersionRequest.Builder to create a request.

Returns:

Result of the GetWorkflowVersion operation returned by the service.

See Also:

• AWS API Documentation

listAnnotationImportJobs

default ListAnnotationImportJobsResponse listAnnotationImportJobs(ListAnnotationImportJobsRequest listAnnotationImportJobsRequest)
                                                           throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of annotation import jobs.

Parameters:

listAnnotationImportJobsRequest -

Returns:

Result of the ListAnnotationImportJobs operation returned by the service.

See Also:

• AWS API Documentation

listAnnotationImportJobs

default ListAnnotationImportJobsResponse listAnnotationImportJobs(Consumer<ListAnnotationImportJobsRequest.Builder> listAnnotationImportJobsRequest)
                                                           throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of annotation import jobs.

This is a convenience which creates an instance of the ListAnnotationImportJobsRequest.Builder avoiding the need to create one manually via ListAnnotationImportJobsRequest.builder()

Parameters:

listAnnotationImportJobsRequest - A Consumer that will call methods on ListAnnotationImportJobsRequest.Builder to create a request.

Returns:

Result of the ListAnnotationImportJobs operation returned by the service.

See Also:

• AWS API Documentation

listAnnotationImportJobsPaginator

default ListAnnotationImportJobsIterable listAnnotationImportJobsPaginator(ListAnnotationImportJobsRequest listAnnotationImportJobsRequest)
                                                                    throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listAnnotationImportJobs(software.amazon.awssdk.services.omics.model.ListAnnotationImportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationImportJobsIterable responses = client.listAnnotationImportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListAnnotationImportJobsIterable responses = client
             .listAnnotationImportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListAnnotationImportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationImportJobsIterable responses = client.listAnnotationImportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listAnnotationImportJobs(software.amazon.awssdk.services.omics.model.ListAnnotationImportJobsRequest) operation.

Parameters:

listAnnotationImportJobsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listAnnotationImportJobsPaginator

default ListAnnotationImportJobsIterable listAnnotationImportJobsPaginator(Consumer<ListAnnotationImportJobsRequest.Builder> listAnnotationImportJobsRequest)
                                                                    throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listAnnotationImportJobs(software.amazon.awssdk.services.omics.model.ListAnnotationImportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationImportJobsIterable responses = client.listAnnotationImportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListAnnotationImportJobsIterable responses = client
             .listAnnotationImportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListAnnotationImportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationImportJobsIterable responses = client.listAnnotationImportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listAnnotationImportJobs(software.amazon.awssdk.services.omics.model.ListAnnotationImportJobsRequest) operation.

This is a convenience which creates an instance of the ListAnnotationImportJobsRequest.Builder avoiding the need to create one manually via ListAnnotationImportJobsRequest.builder()

Parameters:

listAnnotationImportJobsRequest - A Consumer that will call methods on ListAnnotationImportJobsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listAnnotationStoreVersions

default ListAnnotationStoreVersionsResponse listAnnotationStoreVersions(ListAnnotationStoreVersionsRequest listAnnotationStoreVersionsRequest)
                                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Lists the versions of an annotation store.

Parameters:

listAnnotationStoreVersionsRequest -

Returns:

Result of the ListAnnotationStoreVersions operation returned by the service.

See Also:

• AWS API Documentation

listAnnotationStoreVersions

default ListAnnotationStoreVersionsResponse listAnnotationStoreVersions(Consumer<ListAnnotationStoreVersionsRequest.Builder> listAnnotationStoreVersionsRequest)
                                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Lists the versions of an annotation store.

This is a convenience which creates an instance of the ListAnnotationStoreVersionsRequest.Builder avoiding the need to create one manually via ListAnnotationStoreVersionsRequest.builder()

Parameters:

listAnnotationStoreVersionsRequest - A Consumer that will call methods on ListAnnotationStoreVersionsRequest.Builder to create a request.

Returns:

Result of the ListAnnotationStoreVersions operation returned by the service.

See Also:

• AWS API Documentation

listAnnotationStoreVersionsPaginator

default ListAnnotationStoreVersionsIterable listAnnotationStoreVersionsPaginator(ListAnnotationStoreVersionsRequest listAnnotationStoreVersionsRequest)
                                                                          throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listAnnotationStoreVersions(software.amazon.awssdk.services.omics.model.ListAnnotationStoreVersionsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationStoreVersionsIterable responses = client.listAnnotationStoreVersionsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListAnnotationStoreVersionsIterable responses = client
             .listAnnotationStoreVersionsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListAnnotationStoreVersionsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationStoreVersionsIterable responses = client.listAnnotationStoreVersionsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listAnnotationStoreVersions(software.amazon.awssdk.services.omics.model.ListAnnotationStoreVersionsRequest) operation.

Parameters:

listAnnotationStoreVersionsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listAnnotationStoreVersionsPaginator

default ListAnnotationStoreVersionsIterable listAnnotationStoreVersionsPaginator(Consumer<ListAnnotationStoreVersionsRequest.Builder> listAnnotationStoreVersionsRequest)
                                                                          throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listAnnotationStoreVersions(software.amazon.awssdk.services.omics.model.ListAnnotationStoreVersionsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationStoreVersionsIterable responses = client.listAnnotationStoreVersionsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListAnnotationStoreVersionsIterable responses = client
             .listAnnotationStoreVersionsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListAnnotationStoreVersionsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationStoreVersionsIterable responses = client.listAnnotationStoreVersionsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listAnnotationStoreVersions(software.amazon.awssdk.services.omics.model.ListAnnotationStoreVersionsRequest) operation.

This is a convenience which creates an instance of the ListAnnotationStoreVersionsRequest.Builder avoiding the need to create one manually via ListAnnotationStoreVersionsRequest.builder()

Parameters:

listAnnotationStoreVersionsRequest - A Consumer that will call methods on ListAnnotationStoreVersionsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listAnnotationStores

default ListAnnotationStoresResponse listAnnotationStores(ListAnnotationStoresRequest listAnnotationStoresRequest)
                                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of annotation stores.

Parameters:

listAnnotationStoresRequest -

Returns:

Result of the ListAnnotationStores operation returned by the service.

See Also:

• AWS API Documentation

listAnnotationStores

default ListAnnotationStoresResponse listAnnotationStores(Consumer<ListAnnotationStoresRequest.Builder> listAnnotationStoresRequest)
                                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of annotation stores.

This is a convenience which creates an instance of the ListAnnotationStoresRequest.Builder avoiding the need to create one manually via ListAnnotationStoresRequest.builder()

Parameters:

listAnnotationStoresRequest - A Consumer that will call methods on ListAnnotationStoresRequest.Builder to create a request.

Returns:

Result of the ListAnnotationStores operation returned by the service.

See Also:

• AWS API Documentation

listAnnotationStoresPaginator

default ListAnnotationStoresIterable listAnnotationStoresPaginator(ListAnnotationStoresRequest listAnnotationStoresRequest)
                                                            throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listAnnotationStores(software.amazon.awssdk.services.omics.model.ListAnnotationStoresRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationStoresIterable responses = client.listAnnotationStoresPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListAnnotationStoresIterable responses = client
             .listAnnotationStoresPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListAnnotationStoresResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationStoresIterable responses = client.listAnnotationStoresPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listAnnotationStores(software.amazon.awssdk.services.omics.model.ListAnnotationStoresRequest) operation.

Parameters:

listAnnotationStoresRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listAnnotationStoresPaginator

default ListAnnotationStoresIterable listAnnotationStoresPaginator(Consumer<ListAnnotationStoresRequest.Builder> listAnnotationStoresRequest)
                                                            throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listAnnotationStores(software.amazon.awssdk.services.omics.model.ListAnnotationStoresRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationStoresIterable responses = client.listAnnotationStoresPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListAnnotationStoresIterable responses = client
             .listAnnotationStoresPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListAnnotationStoresResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListAnnotationStoresIterable responses = client.listAnnotationStoresPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listAnnotationStores(software.amazon.awssdk.services.omics.model.ListAnnotationStoresRequest) operation.

This is a convenience which creates an instance of the ListAnnotationStoresRequest.Builder avoiding the need to create one manually via ListAnnotationStoresRequest.builder()

Parameters:

listAnnotationStoresRequest - A Consumer that will call methods on ListAnnotationStoresRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listMultipartReadSetUploads

default ListMultipartReadSetUploadsResponse listMultipartReadSetUploads(ListMultipartReadSetUploadsRequest listMultipartReadSetUploadsRequest)
                                                                 throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Lists multipart read set uploads and for in progress uploads. Once the upload is completed, a read set is created and the upload will no longer be returned in the response.

Parameters:

listMultipartReadSetUploadsRequest -

Returns:

Result of the ListMultipartReadSetUploads operation returned by the service.

See Also:

• AWS API Documentation

listMultipartReadSetUploads

default ListMultipartReadSetUploadsResponse listMultipartReadSetUploads(Consumer<ListMultipartReadSetUploadsRequest.Builder> listMultipartReadSetUploadsRequest)
                                                                 throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Lists multipart read set uploads and for in progress uploads. Once the upload is completed, a read set is created and the upload will no longer be returned in the response.

This is a convenience which creates an instance of the ListMultipartReadSetUploadsRequest.Builder avoiding the need to create one manually via ListMultipartReadSetUploadsRequest.builder()

Parameters:

listMultipartReadSetUploadsRequest - A Consumer that will call methods on ListMultipartReadSetUploadsRequest.Builder to create a request.

Returns:

Result of the ListMultipartReadSetUploads operation returned by the service.

See Also:

• AWS API Documentation

listMultipartReadSetUploadsPaginator

default ListMultipartReadSetUploadsIterable listMultipartReadSetUploadsPaginator(ListMultipartReadSetUploadsRequest listMultipartReadSetUploadsRequest)
                                                                          throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listMultipartReadSetUploads(software.amazon.awssdk.services.omics.model.ListMultipartReadSetUploadsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListMultipartReadSetUploadsIterable responses = client.listMultipartReadSetUploadsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListMultipartReadSetUploadsIterable responses = client
             .listMultipartReadSetUploadsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListMultipartReadSetUploadsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListMultipartReadSetUploadsIterable responses = client.listMultipartReadSetUploadsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listMultipartReadSetUploads(software.amazon.awssdk.services.omics.model.ListMultipartReadSetUploadsRequest) operation.

Parameters:

listMultipartReadSetUploadsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listMultipartReadSetUploadsPaginator

default ListMultipartReadSetUploadsIterable listMultipartReadSetUploadsPaginator(Consumer<ListMultipartReadSetUploadsRequest.Builder> listMultipartReadSetUploadsRequest)
                                                                          throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listMultipartReadSetUploads(software.amazon.awssdk.services.omics.model.ListMultipartReadSetUploadsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListMultipartReadSetUploadsIterable responses = client.listMultipartReadSetUploadsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListMultipartReadSetUploadsIterable responses = client
             .listMultipartReadSetUploadsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListMultipartReadSetUploadsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListMultipartReadSetUploadsIterable responses = client.listMultipartReadSetUploadsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listMultipartReadSetUploads(software.amazon.awssdk.services.omics.model.ListMultipartReadSetUploadsRequest) operation.

This is a convenience which creates an instance of the ListMultipartReadSetUploadsRequest.Builder avoiding the need to create one manually via ListMultipartReadSetUploadsRequest.builder()

Parameters:

listMultipartReadSetUploadsRequest - A Consumer that will call methods on ListMultipartReadSetUploadsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSetActivationJobs

default ListReadSetActivationJobsResponse listReadSetActivationJobs(ListReadSetActivationJobsRequest listReadSetActivationJobsRequest)
                                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of read set activation jobs.

Parameters:

listReadSetActivationJobsRequest -

Returns:

Result of the ListReadSetActivationJobs operation returned by the service.

See Also:

• AWS API Documentation

listReadSetActivationJobs

default ListReadSetActivationJobsResponse listReadSetActivationJobs(Consumer<ListReadSetActivationJobsRequest.Builder> listReadSetActivationJobsRequest)
                                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of read set activation jobs.

This is a convenience which creates an instance of the ListReadSetActivationJobsRequest.Builder avoiding the need to create one manually via ListReadSetActivationJobsRequest.builder()

Parameters:

listReadSetActivationJobsRequest - A Consumer that will call methods on ListReadSetActivationJobsRequest.Builder to create a request.

Returns:

Result of the ListReadSetActivationJobs operation returned by the service.

See Also:

• AWS API Documentation

listReadSetActivationJobsPaginator

default ListReadSetActivationJobsIterable listReadSetActivationJobsPaginator(ListReadSetActivationJobsRequest listReadSetActivationJobsRequest)
                                                                      throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSetActivationJobs(software.amazon.awssdk.services.omics.model.ListReadSetActivationJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetActivationJobsIterable responses = client.listReadSetActivationJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetActivationJobsIterable responses = client
             .listReadSetActivationJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetActivationJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetActivationJobsIterable responses = client.listReadSetActivationJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSetActivationJobs(software.amazon.awssdk.services.omics.model.ListReadSetActivationJobsRequest) operation.

Parameters:

listReadSetActivationJobsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSetActivationJobsPaginator

default ListReadSetActivationJobsIterable listReadSetActivationJobsPaginator(Consumer<ListReadSetActivationJobsRequest.Builder> listReadSetActivationJobsRequest)
                                                                      throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSetActivationJobs(software.amazon.awssdk.services.omics.model.ListReadSetActivationJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetActivationJobsIterable responses = client.listReadSetActivationJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetActivationJobsIterable responses = client
             .listReadSetActivationJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetActivationJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetActivationJobsIterable responses = client.listReadSetActivationJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSetActivationJobs(software.amazon.awssdk.services.omics.model.ListReadSetActivationJobsRequest) operation.

This is a convenience which creates an instance of the ListReadSetActivationJobsRequest.Builder avoiding the need to create one manually via ListReadSetActivationJobsRequest.builder()

Parameters:

listReadSetActivationJobsRequest - A Consumer that will call methods on ListReadSetActivationJobsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSetExportJobs

default ListReadSetExportJobsResponse listReadSetExportJobs(ListReadSetExportJobsRequest listReadSetExportJobsRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of read set export jobs.

Parameters:

listReadSetExportJobsRequest -

Returns:

Result of the ListReadSetExportJobs operation returned by the service.

See Also:

• AWS API Documentation

listReadSetExportJobs

default ListReadSetExportJobsResponse listReadSetExportJobs(Consumer<ListReadSetExportJobsRequest.Builder> listReadSetExportJobsRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of read set export jobs.

This is a convenience which creates an instance of the ListReadSetExportJobsRequest.Builder avoiding the need to create one manually via ListReadSetExportJobsRequest.builder()

Parameters:

listReadSetExportJobsRequest - A Consumer that will call methods on ListReadSetExportJobsRequest.Builder to create a request.

Returns:

Result of the ListReadSetExportJobs operation returned by the service.

See Also:

• AWS API Documentation

listReadSetExportJobsPaginator

default ListReadSetExportJobsIterable listReadSetExportJobsPaginator(ListReadSetExportJobsRequest listReadSetExportJobsRequest)
                                                              throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSetExportJobs(software.amazon.awssdk.services.omics.model.ListReadSetExportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetExportJobsIterable responses = client.listReadSetExportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetExportJobsIterable responses = client
             .listReadSetExportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetExportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetExportJobsIterable responses = client.listReadSetExportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSetExportJobs(software.amazon.awssdk.services.omics.model.ListReadSetExportJobsRequest) operation.

Parameters:

listReadSetExportJobsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSetExportJobsPaginator

default ListReadSetExportJobsIterable listReadSetExportJobsPaginator(Consumer<ListReadSetExportJobsRequest.Builder> listReadSetExportJobsRequest)
                                                              throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSetExportJobs(software.amazon.awssdk.services.omics.model.ListReadSetExportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetExportJobsIterable responses = client.listReadSetExportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetExportJobsIterable responses = client
             .listReadSetExportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetExportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetExportJobsIterable responses = client.listReadSetExportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSetExportJobs(software.amazon.awssdk.services.omics.model.ListReadSetExportJobsRequest) operation.

This is a convenience which creates an instance of the ListReadSetExportJobsRequest.Builder avoiding the need to create one manually via ListReadSetExportJobsRequest.builder()

Parameters:

listReadSetExportJobsRequest - A Consumer that will call methods on ListReadSetExportJobsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSetImportJobs

default ListReadSetImportJobsResponse listReadSetImportJobs(ListReadSetImportJobsRequest listReadSetImportJobsRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of read set import jobs.

Parameters:

listReadSetImportJobsRequest -

Returns:

Result of the ListReadSetImportJobs operation returned by the service.

See Also:

• AWS API Documentation

listReadSetImportJobs

default ListReadSetImportJobsResponse listReadSetImportJobs(Consumer<ListReadSetImportJobsRequest.Builder> listReadSetImportJobsRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of read set import jobs.

This is a convenience which creates an instance of the ListReadSetImportJobsRequest.Builder avoiding the need to create one manually via ListReadSetImportJobsRequest.builder()

Parameters:

listReadSetImportJobsRequest - A Consumer that will call methods on ListReadSetImportJobsRequest.Builder to create a request.

Returns:

Result of the ListReadSetImportJobs operation returned by the service.

See Also:

• AWS API Documentation

listReadSetImportJobsPaginator

default ListReadSetImportJobsIterable listReadSetImportJobsPaginator(ListReadSetImportJobsRequest listReadSetImportJobsRequest)
                                                              throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSetImportJobs(software.amazon.awssdk.services.omics.model.ListReadSetImportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetImportJobsIterable responses = client.listReadSetImportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetImportJobsIterable responses = client
             .listReadSetImportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetImportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetImportJobsIterable responses = client.listReadSetImportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSetImportJobs(software.amazon.awssdk.services.omics.model.ListReadSetImportJobsRequest) operation.

Parameters:

listReadSetImportJobsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSetImportJobsPaginator

default ListReadSetImportJobsIterable listReadSetImportJobsPaginator(Consumer<ListReadSetImportJobsRequest.Builder> listReadSetImportJobsRequest)
                                                              throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSetImportJobs(software.amazon.awssdk.services.omics.model.ListReadSetImportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetImportJobsIterable responses = client.listReadSetImportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetImportJobsIterable responses = client
             .listReadSetImportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetImportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetImportJobsIterable responses = client.listReadSetImportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSetImportJobs(software.amazon.awssdk.services.omics.model.ListReadSetImportJobsRequest) operation.

This is a convenience which creates an instance of the ListReadSetImportJobsRequest.Builder avoiding the need to create one manually via ListReadSetImportJobsRequest.builder()

Parameters:

listReadSetImportJobsRequest - A Consumer that will call methods on ListReadSetImportJobsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSetUploadParts

default ListReadSetUploadPartsResponse listReadSetUploadParts(ListReadSetUploadPartsRequest listReadSetUploadPartsRequest)
                                                       throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This operation will list all parts in a requested multipart upload for a sequence store.

Parameters:

listReadSetUploadPartsRequest -

Returns:

Result of the ListReadSetUploadParts operation returned by the service.

See Also:

• AWS API Documentation

listReadSetUploadParts

default ListReadSetUploadPartsResponse listReadSetUploadParts(Consumer<ListReadSetUploadPartsRequest.Builder> listReadSetUploadPartsRequest)
                                                       throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This operation will list all parts in a requested multipart upload for a sequence store.

This is a convenience which creates an instance of the ListReadSetUploadPartsRequest.Builder avoiding the need to create one manually via ListReadSetUploadPartsRequest.builder()

Parameters:

listReadSetUploadPartsRequest - A Consumer that will call methods on ListReadSetUploadPartsRequest.Builder to create a request.

Returns:

Result of the ListReadSetUploadParts operation returned by the service.

See Also:

• AWS API Documentation

listReadSetUploadPartsPaginator

default ListReadSetUploadPartsIterable listReadSetUploadPartsPaginator(ListReadSetUploadPartsRequest listReadSetUploadPartsRequest)
                                                                throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSetUploadParts(software.amazon.awssdk.services.omics.model.ListReadSetUploadPartsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetUploadPartsIterable responses = client.listReadSetUploadPartsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetUploadPartsIterable responses = client
             .listReadSetUploadPartsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetUploadPartsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetUploadPartsIterable responses = client.listReadSetUploadPartsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSetUploadParts(software.amazon.awssdk.services.omics.model.ListReadSetUploadPartsRequest) operation.

Parameters:

listReadSetUploadPartsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSetUploadPartsPaginator

default ListReadSetUploadPartsIterable listReadSetUploadPartsPaginator(Consumer<ListReadSetUploadPartsRequest.Builder> listReadSetUploadPartsRequest)
                                                                throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSetUploadParts(software.amazon.awssdk.services.omics.model.ListReadSetUploadPartsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetUploadPartsIterable responses = client.listReadSetUploadPartsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetUploadPartsIterable responses = client
             .listReadSetUploadPartsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetUploadPartsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetUploadPartsIterable responses = client.listReadSetUploadPartsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSetUploadParts(software.amazon.awssdk.services.omics.model.ListReadSetUploadPartsRequest) operation.

This is a convenience which creates an instance of the ListReadSetUploadPartsRequest.Builder avoiding the need to create one manually via ListReadSetUploadPartsRequest.builder()

Parameters:

listReadSetUploadPartsRequest - A Consumer that will call methods on ListReadSetUploadPartsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSets

default ListReadSetsResponse listReadSets(ListReadSetsRequest listReadSetsRequest)
                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of read sets.

Parameters:

listReadSetsRequest -

Returns:

Result of the ListReadSets operation returned by the service.

See Also:

• AWS API Documentation

listReadSets

default ListReadSetsResponse listReadSets(Consumer<ListReadSetsRequest.Builder> listReadSetsRequest)
                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of read sets.

This is a convenience which creates an instance of the ListReadSetsRequest.Builder avoiding the need to create one manually via ListReadSetsRequest.builder()

Parameters:

listReadSetsRequest - A Consumer that will call methods on ListReadSetsRequest.Builder to create a request.

Returns:

Result of the ListReadSets operation returned by the service.

See Also:

• AWS API Documentation

listReadSetsPaginator

default ListReadSetsIterable listReadSetsPaginator(ListReadSetsRequest listReadSetsRequest)
                                            throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSets(software.amazon.awssdk.services.omics.model.ListReadSetsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetsIterable responses = client.listReadSetsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetsIterable responses = client.listReadSetsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetsIterable responses = client.listReadSetsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSets(software.amazon.awssdk.services.omics.model.ListReadSetsRequest) operation.

Parameters:

listReadSetsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReadSetsPaginator

default ListReadSetsIterable listReadSetsPaginator(Consumer<ListReadSetsRequest.Builder> listReadSetsRequest)
                                            throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReadSets(software.amazon.awssdk.services.omics.model.ListReadSetsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetsIterable responses = client.listReadSetsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReadSetsIterable responses = client.listReadSetsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReadSetsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReadSetsIterable responses = client.listReadSetsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReadSets(software.amazon.awssdk.services.omics.model.ListReadSetsRequest) operation.

This is a convenience which creates an instance of the ListReadSetsRequest.Builder avoiding the need to create one manually via ListReadSetsRequest.builder()

Parameters:

listReadSetsRequest - A Consumer that will call methods on ListReadSetsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReferenceImportJobs

default ListReferenceImportJobsResponse listReferenceImportJobs(ListReferenceImportJobsRequest listReferenceImportJobsRequest)
                                                         throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of reference import jobs.

Parameters:

listReferenceImportJobsRequest -

Returns:

Result of the ListReferenceImportJobs operation returned by the service.

See Also:

• AWS API Documentation

listReferenceImportJobs

default ListReferenceImportJobsResponse listReferenceImportJobs(Consumer<ListReferenceImportJobsRequest.Builder> listReferenceImportJobsRequest)
                                                         throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of reference import jobs.

This is a convenience which creates an instance of the ListReferenceImportJobsRequest.Builder avoiding the need to create one manually via ListReferenceImportJobsRequest.builder()

Parameters:

listReferenceImportJobsRequest - A Consumer that will call methods on ListReferenceImportJobsRequest.Builder to create a request.

Returns:

Result of the ListReferenceImportJobs operation returned by the service.

See Also:

• AWS API Documentation

listReferenceImportJobsPaginator

default ListReferenceImportJobsIterable listReferenceImportJobsPaginator(ListReferenceImportJobsRequest listReferenceImportJobsRequest)
                                                                  throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReferenceImportJobs(software.amazon.awssdk.services.omics.model.ListReferenceImportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReferenceImportJobsIterable responses = client.listReferenceImportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReferenceImportJobsIterable responses = client
             .listReferenceImportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReferenceImportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReferenceImportJobsIterable responses = client.listReferenceImportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReferenceImportJobs(software.amazon.awssdk.services.omics.model.ListReferenceImportJobsRequest) operation.

Parameters:

listReferenceImportJobsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReferenceImportJobsPaginator

default ListReferenceImportJobsIterable listReferenceImportJobsPaginator(Consumer<ListReferenceImportJobsRequest.Builder> listReferenceImportJobsRequest)
                                                                  throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReferenceImportJobs(software.amazon.awssdk.services.omics.model.ListReferenceImportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReferenceImportJobsIterable responses = client.listReferenceImportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReferenceImportJobsIterable responses = client
             .listReferenceImportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReferenceImportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReferenceImportJobsIterable responses = client.listReferenceImportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReferenceImportJobs(software.amazon.awssdk.services.omics.model.ListReferenceImportJobsRequest) operation.

This is a convenience which creates an instance of the ListReferenceImportJobsRequest.Builder avoiding the need to create one manually via ListReferenceImportJobsRequest.builder()

Parameters:

listReferenceImportJobsRequest - A Consumer that will call methods on ListReferenceImportJobsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReferenceStores

default ListReferenceStoresResponse listReferenceStores(ListReferenceStoresRequest listReferenceStoresRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of reference stores.

Parameters:

listReferenceStoresRequest -

Returns:

Result of the ListReferenceStores operation returned by the service.

See Also:

• AWS API Documentation

listReferenceStores

default ListReferenceStoresResponse listReferenceStores(Consumer<ListReferenceStoresRequest.Builder> listReferenceStoresRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of reference stores.

This is a convenience which creates an instance of the ListReferenceStoresRequest.Builder avoiding the need to create one manually via ListReferenceStoresRequest.builder()

Parameters:

listReferenceStoresRequest - A Consumer that will call methods on ListReferenceStoresRequest.Builder to create a request.

Returns:

Result of the ListReferenceStores operation returned by the service.

See Also:

• AWS API Documentation

listReferenceStoresPaginator

default ListReferenceStoresIterable listReferenceStoresPaginator(ListReferenceStoresRequest listReferenceStoresRequest)
                                                          throws InternalServerException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReferenceStores(software.amazon.awssdk.services.omics.model.ListReferenceStoresRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReferenceStoresIterable responses = client.listReferenceStoresPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReferenceStoresIterable responses = client
             .listReferenceStoresPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReferenceStoresResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReferenceStoresIterable responses = client.listReferenceStoresPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReferenceStores(software.amazon.awssdk.services.omics.model.ListReferenceStoresRequest) operation.

Parameters:

listReferenceStoresRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReferenceStoresPaginator

default ListReferenceStoresIterable listReferenceStoresPaginator(Consumer<ListReferenceStoresRequest.Builder> listReferenceStoresRequest)
                                                          throws InternalServerException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReferenceStores(software.amazon.awssdk.services.omics.model.ListReferenceStoresRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReferenceStoresIterable responses = client.listReferenceStoresPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReferenceStoresIterable responses = client
             .listReferenceStoresPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReferenceStoresResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReferenceStoresIterable responses = client.listReferenceStoresPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReferenceStores(software.amazon.awssdk.services.omics.model.ListReferenceStoresRequest) operation.

This is a convenience which creates an instance of the ListReferenceStoresRequest.Builder avoiding the need to create one manually via ListReferenceStoresRequest.builder()

Parameters:

listReferenceStoresRequest - A Consumer that will call methods on ListReferenceStoresRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReferences

default ListReferencesResponse listReferences(ListReferencesRequest listReferencesRequest)
                                       throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of references.

Parameters:

listReferencesRequest -

Returns:

Result of the ListReferences operation returned by the service.

See Also:

• AWS API Documentation

listReferences

default ListReferencesResponse listReferences(Consumer<ListReferencesRequest.Builder> listReferencesRequest)
                                       throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of references.

This is a convenience which creates an instance of the ListReferencesRequest.Builder avoiding the need to create one manually via ListReferencesRequest.builder()

Parameters:

listReferencesRequest - A Consumer that will call methods on ListReferencesRequest.Builder to create a request.

Returns:

Result of the ListReferences operation returned by the service.

See Also:

• AWS API Documentation

listReferencesPaginator

default ListReferencesIterable listReferencesPaginator(ListReferencesRequest listReferencesRequest)
                                                throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReferences(software.amazon.awssdk.services.omics.model.ListReferencesRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReferencesIterable responses = client.listReferencesPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReferencesIterable responses = client.listReferencesPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReferencesResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReferencesIterable responses = client.listReferencesPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReferences(software.amazon.awssdk.services.omics.model.ListReferencesRequest) operation.

Parameters:

listReferencesRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listReferencesPaginator

default ListReferencesIterable listReferencesPaginator(Consumer<ListReferencesRequest.Builder> listReferencesRequest)
                                                throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listReferences(software.amazon.awssdk.services.omics.model.ListReferencesRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListReferencesIterable responses = client.listReferencesPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListReferencesIterable responses = client.listReferencesPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListReferencesResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListReferencesIterable responses = client.listReferencesPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listReferences(software.amazon.awssdk.services.omics.model.ListReferencesRequest) operation.

This is a convenience which creates an instance of the ListReferencesRequest.Builder avoiding the need to create one manually via ListReferencesRequest.builder()

Parameters:

listReferencesRequest - A Consumer that will call methods on ListReferencesRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listRunCaches

default ListRunCachesResponse listRunCaches(ListRunCachesRequest listRunCachesRequest)
                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of your run caches.

Parameters:

listRunCachesRequest -

Returns:

Result of the ListRunCaches operation returned by the service.

See Also:

• AWS API Documentation

listRunCaches

default ListRunCachesResponse listRunCaches(Consumer<ListRunCachesRequest.Builder> listRunCachesRequest)
                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of your run caches.

This is a convenience which creates an instance of the ListRunCachesRequest.Builder avoiding the need to create one manually via ListRunCachesRequest.builder()

Parameters:

listRunCachesRequest - A Consumer that will call methods on ListRunCachesRequest.Builder to create a request.

Returns:

Result of the ListRunCaches operation returned by the service.

See Also:

• AWS API Documentation

listRunCachesPaginator

default ListRunCachesIterable listRunCachesPaginator(ListRunCachesRequest listRunCachesRequest)
                                              throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listRunCaches(software.amazon.awssdk.services.omics.model.ListRunCachesRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListRunCachesIterable responses = client.listRunCachesPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListRunCachesIterable responses = client.listRunCachesPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListRunCachesResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListRunCachesIterable responses = client.listRunCachesPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listRunCaches(software.amazon.awssdk.services.omics.model.ListRunCachesRequest) operation.

Parameters:

listRunCachesRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listRunCachesPaginator

default ListRunCachesIterable listRunCachesPaginator(Consumer<ListRunCachesRequest.Builder> listRunCachesRequest)
                                              throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listRunCaches(software.amazon.awssdk.services.omics.model.ListRunCachesRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListRunCachesIterable responses = client.listRunCachesPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListRunCachesIterable responses = client.listRunCachesPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListRunCachesResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListRunCachesIterable responses = client.listRunCachesPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listRunCaches(software.amazon.awssdk.services.omics.model.ListRunCachesRequest) operation.

This is a convenience which creates an instance of the ListRunCachesRequest.Builder avoiding the need to create one manually via ListRunCachesRequest.builder()

Parameters:

listRunCachesRequest - A Consumer that will call methods on ListRunCachesRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listRunGroups

default ListRunGroupsResponse listRunGroups(ListRunGroupsRequest listRunGroupsRequest)
                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of run groups.

Parameters:

listRunGroupsRequest -

Returns:

Result of the ListRunGroups operation returned by the service.

See Also:

• AWS API Documentation

listRunGroups

default ListRunGroupsResponse listRunGroups(Consumer<ListRunGroupsRequest.Builder> listRunGroupsRequest)
                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of run groups.

This is a convenience which creates an instance of the ListRunGroupsRequest.Builder avoiding the need to create one manually via ListRunGroupsRequest.builder()

Parameters:

listRunGroupsRequest - A Consumer that will call methods on ListRunGroupsRequest.Builder to create a request.

Returns:

Result of the ListRunGroups operation returned by the service.

See Also:

• AWS API Documentation

listRunGroupsPaginator

default ListRunGroupsIterable listRunGroupsPaginator(ListRunGroupsRequest listRunGroupsRequest)
                                              throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listRunGroups(software.amazon.awssdk.services.omics.model.ListRunGroupsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListRunGroupsIterable responses = client.listRunGroupsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListRunGroupsIterable responses = client.listRunGroupsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListRunGroupsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListRunGroupsIterable responses = client.listRunGroupsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listRunGroups(software.amazon.awssdk.services.omics.model.ListRunGroupsRequest) operation.

Parameters:

listRunGroupsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listRunGroupsPaginator

default ListRunGroupsIterable listRunGroupsPaginator(Consumer<ListRunGroupsRequest.Builder> listRunGroupsRequest)
                                              throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listRunGroups(software.amazon.awssdk.services.omics.model.ListRunGroupsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListRunGroupsIterable responses = client.listRunGroupsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListRunGroupsIterable responses = client.listRunGroupsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListRunGroupsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListRunGroupsIterable responses = client.listRunGroupsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listRunGroups(software.amazon.awssdk.services.omics.model.ListRunGroupsRequest) operation.

This is a convenience which creates an instance of the ListRunGroupsRequest.Builder avoiding the need to create one manually via ListRunGroupsRequest.builder()

Parameters:

listRunGroupsRequest - A Consumer that will call methods on ListRunGroupsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listRunTasks

default ListRunTasksResponse listRunTasks(ListRunTasksRequest listRunTasksRequest)
                                   throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of tasks for a run.

Parameters:

listRunTasksRequest -

Returns:

Result of the ListRunTasks operation returned by the service.

See Also:

• AWS API Documentation

listRunTasks

default ListRunTasksResponse listRunTasks(Consumer<ListRunTasksRequest.Builder> listRunTasksRequest)
                                   throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of tasks for a run.

This is a convenience which creates an instance of the ListRunTasksRequest.Builder avoiding the need to create one manually via ListRunTasksRequest.builder()

Parameters:

listRunTasksRequest - A Consumer that will call methods on ListRunTasksRequest.Builder to create a request.

Returns:

Result of the ListRunTasks operation returned by the service.

See Also:

• AWS API Documentation

listRunTasksPaginator

default ListRunTasksIterable listRunTasksPaginator(ListRunTasksRequest listRunTasksRequest)
                                            throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listRunTasks(software.amazon.awssdk.services.omics.model.ListRunTasksRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListRunTasksIterable responses = client.listRunTasksPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListRunTasksIterable responses = client.listRunTasksPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListRunTasksResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListRunTasksIterable responses = client.listRunTasksPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listRunTasks(software.amazon.awssdk.services.omics.model.ListRunTasksRequest) operation.

Parameters:

listRunTasksRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listRunTasksPaginator

default ListRunTasksIterable listRunTasksPaginator(Consumer<ListRunTasksRequest.Builder> listRunTasksRequest)
                                            throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listRunTasks(software.amazon.awssdk.services.omics.model.ListRunTasksRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListRunTasksIterable responses = client.listRunTasksPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListRunTasksIterable responses = client.listRunTasksPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListRunTasksResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListRunTasksIterable responses = client.listRunTasksPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listRunTasks(software.amazon.awssdk.services.omics.model.ListRunTasksRequest) operation.

This is a convenience which creates an instance of the ListRunTasksRequest.Builder avoiding the need to create one manually via ListRunTasksRequest.builder()

Parameters:

listRunTasksRequest - A Consumer that will call methods on ListRunTasksRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listRuns

default ListRunsResponse listRuns(ListRunsRequest listRunsRequest)
                           throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of runs.

Amazon Web Services HealthOmics stores a fixed number of runs that are available to the console and API. If the ListRuns response doesn't include specific runs that you expected, you can find run logs for all runs in the CloudWatch logs. For more information about viewing the run logs, see CloudWatch logs in the Amazon Web Services HealthOmics User Guide.

Parameters:

listRunsRequest -

Returns:

Result of the ListRuns operation returned by the service.

See Also:

• AWS API Documentation

listRuns

default ListRunsResponse listRuns(Consumer<ListRunsRequest.Builder> listRunsRequest)
                           throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of runs.

Amazon Web Services HealthOmics stores a fixed number of runs that are available to the console and API. If the ListRuns response doesn't include specific runs that you expected, you can find run logs for all runs in the CloudWatch logs. For more information about viewing the run logs, see CloudWatch logs in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the ListRunsRequest.Builder avoiding the need to create one manually via ListRunsRequest.builder()

Parameters:

listRunsRequest - A Consumer that will call methods on ListRunsRequest.Builder to create a request.

Returns:

Result of the ListRuns operation returned by the service.

See Also:

• AWS API Documentation

listRunsPaginator

default ListRunsIterable listRunsPaginator(ListRunsRequest listRunsRequest)
                                    throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listRuns(software.amazon.awssdk.services.omics.model.ListRunsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListRunsIterable responses = client.listRunsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListRunsIterable responses = client.listRunsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListRunsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListRunsIterable responses = client.listRunsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listRuns(software.amazon.awssdk.services.omics.model.ListRunsRequest) operation.

Parameters:

listRunsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listRunsPaginator

default ListRunsIterable listRunsPaginator(Consumer<ListRunsRequest.Builder> listRunsRequest)
                                    throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listRuns(software.amazon.awssdk.services.omics.model.ListRunsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListRunsIterable responses = client.listRunsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListRunsIterable responses = client.listRunsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListRunsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListRunsIterable responses = client.listRunsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listRuns(software.amazon.awssdk.services.omics.model.ListRunsRequest) operation.

This is a convenience which creates an instance of the ListRunsRequest.Builder avoiding the need to create one manually via ListRunsRequest.builder()

Parameters:

listRunsRequest - A Consumer that will call methods on ListRunsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listSequenceStores

default ListSequenceStoresResponse listSequenceStores(ListSequenceStoresRequest listSequenceStoresRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of sequence stores.

Parameters:

listSequenceStoresRequest -

Returns:

Result of the ListSequenceStores operation returned by the service.

See Also:

• AWS API Documentation

listSequenceStores

default ListSequenceStoresResponse listSequenceStores(Consumer<ListSequenceStoresRequest.Builder> listSequenceStoresRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of sequence stores.

This is a convenience which creates an instance of the ListSequenceStoresRequest.Builder avoiding the need to create one manually via ListSequenceStoresRequest.builder()

Parameters:

listSequenceStoresRequest - A Consumer that will call methods on ListSequenceStoresRequest.Builder to create a request.

Returns:

Result of the ListSequenceStores operation returned by the service.

See Also:

• AWS API Documentation

listSequenceStoresPaginator

default ListSequenceStoresIterable listSequenceStoresPaginator(ListSequenceStoresRequest listSequenceStoresRequest)
                                                        throws InternalServerException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listSequenceStores(software.amazon.awssdk.services.omics.model.ListSequenceStoresRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListSequenceStoresIterable responses = client.listSequenceStoresPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListSequenceStoresIterable responses = client
             .listSequenceStoresPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListSequenceStoresResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListSequenceStoresIterable responses = client.listSequenceStoresPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listSequenceStores(software.amazon.awssdk.services.omics.model.ListSequenceStoresRequest) operation.

Parameters:

listSequenceStoresRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listSequenceStoresPaginator

default ListSequenceStoresIterable listSequenceStoresPaginator(Consumer<ListSequenceStoresRequest.Builder> listSequenceStoresRequest)
                                                        throws InternalServerException,
ThrottlingException,
ValidationException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listSequenceStores(software.amazon.awssdk.services.omics.model.ListSequenceStoresRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListSequenceStoresIterable responses = client.listSequenceStoresPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListSequenceStoresIterable responses = client
             .listSequenceStoresPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListSequenceStoresResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListSequenceStoresIterable responses = client.listSequenceStoresPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listSequenceStores(software.amazon.awssdk.services.omics.model.ListSequenceStoresRequest) operation.

This is a convenience which creates an instance of the ListSequenceStoresRequest.Builder avoiding the need to create one manually via ListSequenceStoresRequest.builder()

Parameters:

listSequenceStoresRequest - A Consumer that will call methods on ListSequenceStoresRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listShares

default ListSharesResponse listShares(ListSharesRequest listSharesRequest)
                               throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves the resource shares associated with an account. Use the filter parameter to retrieve a specific subset of the shares.

Parameters:

listSharesRequest -

Returns:

Result of the ListShares operation returned by the service.

See Also:

• AWS API Documentation

listShares

default ListSharesResponse listShares(Consumer<ListSharesRequest.Builder> listSharesRequest)
                               throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves the resource shares associated with an account. Use the filter parameter to retrieve a specific subset of the shares.

This is a convenience which creates an instance of the ListSharesRequest.Builder avoiding the need to create one manually via ListSharesRequest.builder()

Parameters:

listSharesRequest - A Consumer that will call methods on ListSharesRequest.Builder to create a request.

Returns:

Result of the ListShares operation returned by the service.

See Also:

• AWS API Documentation

listSharesPaginator

default ListSharesIterable listSharesPaginator(ListSharesRequest listSharesRequest)
                                        throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listShares(software.amazon.awssdk.services.omics.model.ListSharesRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListSharesIterable responses = client.listSharesPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListSharesIterable responses = client.listSharesPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListSharesResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListSharesIterable responses = client.listSharesPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listShares(software.amazon.awssdk.services.omics.model.ListSharesRequest) operation.

Parameters:

listSharesRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listSharesPaginator

default ListSharesIterable listSharesPaginator(Consumer<ListSharesRequest.Builder> listSharesRequest)
                                        throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listShares(software.amazon.awssdk.services.omics.model.ListSharesRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListSharesIterable responses = client.listSharesPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListSharesIterable responses = client.listSharesPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListSharesResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListSharesIterable responses = client.listSharesPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listShares(software.amazon.awssdk.services.omics.model.ListSharesRequest) operation.

This is a convenience which creates an instance of the ListSharesRequest.Builder avoiding the need to create one manually via ListSharesRequest.builder()

Parameters:

listSharesRequest - A Consumer that will call methods on ListSharesRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listTagsForResource

default ListTagsForResourceResponse listTagsForResource(ListTagsForResourceRequest listTagsForResourceRequest)
                                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of tags for a resource.

Parameters:

listTagsForResourceRequest -

Returns:

Result of the ListTagsForResource operation returned by the service.

See Also:

• AWS API Documentation

listTagsForResource

default ListTagsForResourceResponse listTagsForResource(Consumer<ListTagsForResourceRequest.Builder> listTagsForResourceRequest)
                                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of tags for a resource.

This is a convenience which creates an instance of the ListTagsForResourceRequest.Builder avoiding the need to create one manually via ListTagsForResourceRequest.builder()

Parameters:

listTagsForResourceRequest - A Consumer that will call methods on ListTagsForResourceRequest.Builder to create a request.

Returns:

Result of the ListTagsForResource operation returned by the service.

See Also:

• AWS API Documentation

listVariantImportJobs

default ListVariantImportJobsResponse listVariantImportJobs(ListVariantImportJobsRequest listVariantImportJobsRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of variant import jobs.

Parameters:

listVariantImportJobsRequest -

Returns:

Result of the ListVariantImportJobs operation returned by the service.

See Also:

• AWS API Documentation

listVariantImportJobs

default ListVariantImportJobsResponse listVariantImportJobs(Consumer<ListVariantImportJobsRequest.Builder> listVariantImportJobsRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of variant import jobs.

This is a convenience which creates an instance of the ListVariantImportJobsRequest.Builder avoiding the need to create one manually via ListVariantImportJobsRequest.builder()

Parameters:

listVariantImportJobsRequest - A Consumer that will call methods on ListVariantImportJobsRequest.Builder to create a request.

Returns:

Result of the ListVariantImportJobs operation returned by the service.

See Also:

• AWS API Documentation

listVariantImportJobsPaginator

default ListVariantImportJobsIterable listVariantImportJobsPaginator(ListVariantImportJobsRequest listVariantImportJobsRequest)
                                                              throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listVariantImportJobs(software.amazon.awssdk.services.omics.model.ListVariantImportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListVariantImportJobsIterable responses = client.listVariantImportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListVariantImportJobsIterable responses = client
             .listVariantImportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListVariantImportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListVariantImportJobsIterable responses = client.listVariantImportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listVariantImportJobs(software.amazon.awssdk.services.omics.model.ListVariantImportJobsRequest) operation.

Parameters:

listVariantImportJobsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listVariantImportJobsPaginator

default ListVariantImportJobsIterable listVariantImportJobsPaginator(Consumer<ListVariantImportJobsRequest.Builder> listVariantImportJobsRequest)
                                                              throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listVariantImportJobs(software.amazon.awssdk.services.omics.model.ListVariantImportJobsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListVariantImportJobsIterable responses = client.listVariantImportJobsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListVariantImportJobsIterable responses = client
             .listVariantImportJobsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListVariantImportJobsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListVariantImportJobsIterable responses = client.listVariantImportJobsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listVariantImportJobs(software.amazon.awssdk.services.omics.model.ListVariantImportJobsRequest) operation.

This is a convenience which creates an instance of the ListVariantImportJobsRequest.Builder avoiding the need to create one manually via ListVariantImportJobsRequest.builder()

Parameters:

listVariantImportJobsRequest - A Consumer that will call methods on ListVariantImportJobsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listVariantStores

default ListVariantStoresResponse listVariantStores(ListVariantStoresRequest listVariantStoresRequest)
                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of variant stores.

Parameters:

listVariantStoresRequest -

Returns:

Result of the ListVariantStores operation returned by the service.

See Also:

• AWS API Documentation

listVariantStores

default ListVariantStoresResponse listVariantStores(Consumer<ListVariantStoresRequest.Builder> listVariantStoresRequest)
                                             throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of variant stores.

This is a convenience which creates an instance of the ListVariantStoresRequest.Builder avoiding the need to create one manually via ListVariantStoresRequest.builder()

Parameters:

listVariantStoresRequest - A Consumer that will call methods on ListVariantStoresRequest.Builder to create a request.

Returns:

Result of the ListVariantStores operation returned by the service.

See Also:

• AWS API Documentation

listVariantStoresPaginator

default ListVariantStoresIterable listVariantStoresPaginator(ListVariantStoresRequest listVariantStoresRequest)
                                                      throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listVariantStores(software.amazon.awssdk.services.omics.model.ListVariantStoresRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListVariantStoresIterable responses = client.listVariantStoresPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListVariantStoresIterable responses = client
             .listVariantStoresPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListVariantStoresResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListVariantStoresIterable responses = client.listVariantStoresPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listVariantStores(software.amazon.awssdk.services.omics.model.ListVariantStoresRequest) operation.

Parameters:

listVariantStoresRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listVariantStoresPaginator

default ListVariantStoresIterable listVariantStoresPaginator(Consumer<ListVariantStoresRequest.Builder> listVariantStoresRequest)
                                                      throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listVariantStores(software.amazon.awssdk.services.omics.model.ListVariantStoresRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListVariantStoresIterable responses = client.listVariantStoresPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListVariantStoresIterable responses = client
             .listVariantStoresPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListVariantStoresResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListVariantStoresIterable responses = client.listVariantStoresPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listVariantStores(software.amazon.awssdk.services.omics.model.ListVariantStoresRequest) operation.

This is a convenience which creates an instance of the ListVariantStoresRequest.Builder avoiding the need to create one manually via ListVariantStoresRequest.builder()

Parameters:

listVariantStoresRequest - A Consumer that will call methods on ListVariantStoresRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listWorkflowVersions

default ListWorkflowVersionsResponse listWorkflowVersions(ListWorkflowVersionsRequest listWorkflowVersionsRequest)
                                                   throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Lists the workflow versions for the specified workflow. For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

Parameters:

listWorkflowVersionsRequest -

Returns:

Result of the ListWorkflowVersions operation returned by the service.

See Also:

• AWS API Documentation

listWorkflowVersions

default ListWorkflowVersionsResponse listWorkflowVersions(Consumer<ListWorkflowVersionsRequest.Builder> listWorkflowVersionsRequest)
                                                   throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Lists the workflow versions for the specified workflow. For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the ListWorkflowVersionsRequest.Builder avoiding the need to create one manually via ListWorkflowVersionsRequest.builder()

Parameters:

listWorkflowVersionsRequest - A Consumer that will call methods on ListWorkflowVersionsRequest.Builder to create a request.

Returns:

Result of the ListWorkflowVersions operation returned by the service.

See Also:

• AWS API Documentation

listWorkflowVersionsPaginator

default ListWorkflowVersionsIterable listWorkflowVersionsPaginator(ListWorkflowVersionsRequest listWorkflowVersionsRequest)
                                                            throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listWorkflowVersions(software.amazon.awssdk.services.omics.model.ListWorkflowVersionsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListWorkflowVersionsIterable responses = client.listWorkflowVersionsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListWorkflowVersionsIterable responses = client
             .listWorkflowVersionsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListWorkflowVersionsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListWorkflowVersionsIterable responses = client.listWorkflowVersionsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listWorkflowVersions(software.amazon.awssdk.services.omics.model.ListWorkflowVersionsRequest) operation.

Parameters:

listWorkflowVersionsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listWorkflowVersionsPaginator

default ListWorkflowVersionsIterable listWorkflowVersionsPaginator(Consumer<ListWorkflowVersionsRequest.Builder> listWorkflowVersionsRequest)
                                                            throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listWorkflowVersions(software.amazon.awssdk.services.omics.model.ListWorkflowVersionsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListWorkflowVersionsIterable responses = client.listWorkflowVersionsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListWorkflowVersionsIterable responses = client
             .listWorkflowVersionsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListWorkflowVersionsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListWorkflowVersionsIterable responses = client.listWorkflowVersionsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listWorkflowVersions(software.amazon.awssdk.services.omics.model.ListWorkflowVersionsRequest) operation.

This is a convenience which creates an instance of the ListWorkflowVersionsRequest.Builder avoiding the need to create one manually via ListWorkflowVersionsRequest.builder()

Parameters:

listWorkflowVersionsRequest - A Consumer that will call methods on ListWorkflowVersionsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listWorkflows

default ListWorkflowsResponse listWorkflows(ListWorkflowsRequest listWorkflowsRequest)
                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of workflows.

Parameters:

listWorkflowsRequest -

Returns:

Result of the ListWorkflows operation returned by the service.

See Also:

• AWS API Documentation

listWorkflows

default ListWorkflowsResponse listWorkflows(Consumer<ListWorkflowsRequest.Builder> listWorkflowsRequest)
                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Retrieves a list of workflows.

This is a convenience which creates an instance of the ListWorkflowsRequest.Builder avoiding the need to create one manually via ListWorkflowsRequest.builder()

Parameters:

listWorkflowsRequest - A Consumer that will call methods on ListWorkflowsRequest.Builder to create a request.

Returns:

Result of the ListWorkflows operation returned by the service.

See Also:

• AWS API Documentation

listWorkflowsPaginator

default ListWorkflowsIterable listWorkflowsPaginator(ListWorkflowsRequest listWorkflowsRequest)
                                              throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listWorkflows(software.amazon.awssdk.services.omics.model.ListWorkflowsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListWorkflowsIterable responses = client.listWorkflowsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListWorkflowsIterable responses = client.listWorkflowsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListWorkflowsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListWorkflowsIterable responses = client.listWorkflowsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listWorkflows(software.amazon.awssdk.services.omics.model.ListWorkflowsRequest) operation.

Parameters:

listWorkflowsRequest -

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

listWorkflowsPaginator

default ListWorkflowsIterable listWorkflowsPaginator(Consumer<ListWorkflowsRequest.Builder> listWorkflowsRequest)
                                              throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This is a variant of listWorkflows(software.amazon.awssdk.services.omics.model.ListWorkflowsRequest) operation. The return type is a custom iterable that can be used to iterate through all the pages. SDK will internally handle making service calls for you.

When this operation is called, a custom iterable is returned but no service calls are made yet. So there is no guarantee that the request is valid. As you iterate through the iterable, SDK will start lazily loading response pages by making service calls until there are no pages left or your iteration stops. If there are errors in your request, you will see the failures only after you start iterating through the iterable.

The following are few ways to iterate through the response pages:

1) Using a Stream

 
 software.amazon.awssdk.services.omics.paginators.ListWorkflowsIterable responses = client.listWorkflowsPaginator(request);
 responses.stream().forEach(....);
 
 

2) Using For loop

 {
     @code
     software.amazon.awssdk.services.omics.paginators.ListWorkflowsIterable responses = client.listWorkflowsPaginator(request);
     for (software.amazon.awssdk.services.omics.model.ListWorkflowsResponse response : responses) {
         // do something;
     }
 }
 

3) Use iterator directly

 
 software.amazon.awssdk.services.omics.paginators.ListWorkflowsIterable responses = client.listWorkflowsPaginator(request);
 responses.iterator().forEachRemaining(....);
 
 

Please notice that the configuration of maxResults won't limit the number of results you get with the paginator. It only limits the number of results in each page.

Note: If you prefer to have control on service calls, use the listWorkflows(software.amazon.awssdk.services.omics.model.ListWorkflowsRequest) operation.

This is a convenience which creates an instance of the ListWorkflowsRequest.Builder avoiding the need to create one manually via ListWorkflowsRequest.builder()

Parameters:

listWorkflowsRequest - A Consumer that will call methods on ListWorkflowsRequest.Builder to create a request.

Returns:

A custom iterable that can be used to iterate through all the response pages.

See Also:

• AWS API Documentation

putS3AccessPolicy

default PutS3AccessPolicyResponse putS3AccessPolicy(PutS3AccessPolicyRequest putS3AccessPolicyRequest)
                                             throws NotSupportedOperationException,
InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Adds an access policy to the specified store.

Parameters:

putS3AccessPolicyRequest -

Returns:

Result of the PutS3AccessPolicy operation returned by the service.

See Also:

• AWS API Documentation

putS3AccessPolicy

default PutS3AccessPolicyResponse putS3AccessPolicy(Consumer<PutS3AccessPolicyRequest.Builder> putS3AccessPolicyRequest)
                                             throws NotSupportedOperationException,
InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Adds an access policy to the specified store.

This is a convenience which creates an instance of the PutS3AccessPolicyRequest.Builder avoiding the need to create one manually via PutS3AccessPolicyRequest.builder()

Parameters:

putS3AccessPolicyRequest - A Consumer that will call methods on PutS3AccessPolicyRequest.Builder to create a request.

Returns:

Result of the PutS3AccessPolicy operation returned by the service.

See Also:

• AWS API Documentation

startAnnotationImportJob

default StartAnnotationImportJobResponse startAnnotationImportJob(StartAnnotationImportJobRequest startAnnotationImportJobRequest)
                                                           throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Starts an annotation import job.

Parameters:

startAnnotationImportJobRequest -

Returns:

Result of the StartAnnotationImportJob operation returned by the service.

See Also:

• AWS API Documentation

startAnnotationImportJob

default StartAnnotationImportJobResponse startAnnotationImportJob(Consumer<StartAnnotationImportJobRequest.Builder> startAnnotationImportJobRequest)
                                                           throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Starts an annotation import job.

This is a convenience which creates an instance of the StartAnnotationImportJobRequest.Builder avoiding the need to create one manually via StartAnnotationImportJobRequest.builder()

Parameters:

startAnnotationImportJobRequest - A Consumer that will call methods on StartAnnotationImportJobRequest.Builder to create a request.

Returns:

Result of the StartAnnotationImportJob operation returned by the service.

See Also:

• AWS API Documentation

startReadSetActivationJob

default StartReadSetActivationJobResponse startReadSetActivationJob(StartReadSetActivationJobRequest startReadSetActivationJobRequest)
                                                             throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Activates an archived read set. To reduce storage charges, Amazon Omics archives unused read sets after 30 days.

Parameters:

startReadSetActivationJobRequest -

Returns:

Result of the StartReadSetActivationJob operation returned by the service.

See Also:

• AWS API Documentation

startReadSetActivationJob

default StartReadSetActivationJobResponse startReadSetActivationJob(Consumer<StartReadSetActivationJobRequest.Builder> startReadSetActivationJobRequest)
                                                             throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Activates an archived read set. To reduce storage charges, Amazon Omics archives unused read sets after 30 days.

This is a convenience which creates an instance of the StartReadSetActivationJobRequest.Builder avoiding the need to create one manually via StartReadSetActivationJobRequest.builder()

Parameters:

startReadSetActivationJobRequest - A Consumer that will call methods on StartReadSetActivationJobRequest.Builder to create a request.

Returns:

Result of the StartReadSetActivationJob operation returned by the service.

See Also:

• AWS API Documentation

startReadSetExportJob

default StartReadSetExportJobResponse startReadSetExportJob(StartReadSetExportJobRequest startReadSetExportJobRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Exports a read set to Amazon S3.

Parameters:

startReadSetExportJobRequest -

Returns:

Result of the StartReadSetExportJob operation returned by the service.

See Also:

• AWS API Documentation

startReadSetExportJob

default StartReadSetExportJobResponse startReadSetExportJob(Consumer<StartReadSetExportJobRequest.Builder> startReadSetExportJobRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Exports a read set to Amazon S3.

This is a convenience which creates an instance of the StartReadSetExportJobRequest.Builder avoiding the need to create one manually via StartReadSetExportJobRequest.builder()

Parameters:

startReadSetExportJobRequest - A Consumer that will call methods on StartReadSetExportJobRequest.Builder to create a request.

Returns:

Result of the StartReadSetExportJob operation returned by the service.

See Also:

• AWS API Documentation

startReadSetImportJob

default StartReadSetImportJobResponse startReadSetImportJob(StartReadSetImportJobRequest startReadSetImportJobRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Starts a read set import job.

Parameters:

startReadSetImportJobRequest -

Returns:

Result of the StartReadSetImportJob operation returned by the service.

See Also:

• AWS API Documentation

startReadSetImportJob

default StartReadSetImportJobResponse startReadSetImportJob(Consumer<StartReadSetImportJobRequest.Builder> startReadSetImportJobRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Starts a read set import job.

This is a convenience which creates an instance of the StartReadSetImportJobRequest.Builder avoiding the need to create one manually via StartReadSetImportJobRequest.builder()

Parameters:

startReadSetImportJobRequest - A Consumer that will call methods on StartReadSetImportJobRequest.Builder to create a request.

Returns:

Result of the StartReadSetImportJob operation returned by the service.

See Also:

• AWS API Documentation

startReferenceImportJob

default StartReferenceImportJobResponse startReferenceImportJob(StartReferenceImportJobRequest startReferenceImportJobRequest)
                                                         throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Starts a reference import job.

Parameters:

startReferenceImportJobRequest -

Returns:

Result of the StartReferenceImportJob operation returned by the service.

See Also:

• AWS API Documentation

startReferenceImportJob

default StartReferenceImportJobResponse startReferenceImportJob(Consumer<StartReferenceImportJobRequest.Builder> startReferenceImportJobRequest)
                                                         throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Starts a reference import job.

This is a convenience which creates an instance of the StartReferenceImportJobRequest.Builder avoiding the need to create one manually via StartReferenceImportJobRequest.builder()

Parameters:

startReferenceImportJobRequest - A Consumer that will call methods on StartReferenceImportJobRequest.Builder to create a request.

Returns:

Result of the StartReferenceImportJob operation returned by the service.

See Also:

• AWS API Documentation

startRun

default StartRunResponse startRun(StartRunRequest startRunRequest)
                           throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Starts a new run or duplicates an existing run.

For a new run, specify a unique requestId, the workflowId, and a role ARN. If you're using static run storage (the default), specify the required storageCapacity.

You duplicate a run by specifing a unique requestId, the runID of the run to duplicate, and a role ARN.

For more information about the optional parameters in the StartRun request, see Starting a run in the Amazon Web Services HealthOmics User Guide.

Parameters:

startRunRequest -

Returns:

Result of the StartRun operation returned by the service.

See Also:

• AWS API Documentation

startRun

default StartRunResponse startRun(Consumer<StartRunRequest.Builder> startRunRequest)
                           throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Starts a new run or duplicates an existing run.

For a new run, specify a unique requestId, the workflowId, and a role ARN. If you're using static run storage (the default), specify the required storageCapacity.

You duplicate a run by specifing a unique requestId, the runID of the run to duplicate, and a role ARN.

For more information about the optional parameters in the StartRun request, see Starting a run in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the StartRunRequest.Builder avoiding the need to create one manually via StartRunRequest.builder()

Parameters:

startRunRequest - A Consumer that will call methods on StartRunRequest.Builder to create a request.

Returns:

Result of the StartRun operation returned by the service.

See Also:

• AWS API Documentation

startVariantImportJob

default StartVariantImportJobResponse startVariantImportJob(StartVariantImportJobRequest startVariantImportJobRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Starts a variant import job.

Parameters:

startVariantImportJobRequest -

Returns:

Result of the StartVariantImportJob operation returned by the service.

See Also:

• AWS API Documentation

startVariantImportJob

default StartVariantImportJobResponse startVariantImportJob(Consumer<StartVariantImportJobRequest.Builder> startVariantImportJobRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Starts a variant import job.

This is a convenience which creates an instance of the StartVariantImportJobRequest.Builder avoiding the need to create one manually via StartVariantImportJobRequest.builder()

Parameters:

startVariantImportJobRequest - A Consumer that will call methods on StartVariantImportJobRequest.Builder to create a request.

Returns:

Result of the StartVariantImportJob operation returned by the service.

See Also:

• AWS API Documentation

tagResource

default TagResourceResponse tagResource(TagResourceRequest tagResourceRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Tags a resource.

Parameters:

tagResourceRequest -

Returns:

Result of the TagResource operation returned by the service.

See Also:

• AWS API Documentation

tagResource

default TagResourceResponse tagResource(Consumer<TagResourceRequest.Builder> tagResourceRequest)
                                 throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Tags a resource.

This is a convenience which creates an instance of the TagResourceRequest.Builder avoiding the need to create one manually via TagResourceRequest.builder()

Parameters:

tagResourceRequest - A Consumer that will call methods on TagResourceRequest.Builder to create a request.

Returns:

Result of the TagResource operation returned by the service.

See Also:

• AWS API Documentation

untagResource

default UntagResourceResponse untagResource(UntagResourceRequest untagResourceRequest)
                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Removes tags from a resource.

Parameters:

untagResourceRequest -

Returns:

Result of the UntagResource operation returned by the service.

See Also:

• AWS API Documentation

untagResource

default UntagResourceResponse untagResource(Consumer<UntagResourceRequest.Builder> untagResourceRequest)
                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Removes tags from a resource.

This is a convenience which creates an instance of the UntagResourceRequest.Builder avoiding the need to create one manually via UntagResourceRequest.builder()

Parameters:

untagResourceRequest - A Consumer that will call methods on UntagResourceRequest.Builder to create a request.

Returns:

Result of the UntagResource operation returned by the service.

See Also:

• AWS API Documentation

updateAnnotationStore

default UpdateAnnotationStoreResponse updateAnnotationStore(UpdateAnnotationStoreRequest updateAnnotationStoreRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Updates an annotation store.

Parameters:

updateAnnotationStoreRequest -

Returns:

Result of the UpdateAnnotationStore operation returned by the service.

See Also:

• AWS API Documentation

updateAnnotationStore

default UpdateAnnotationStoreResponse updateAnnotationStore(Consumer<UpdateAnnotationStoreRequest.Builder> updateAnnotationStoreRequest)
                                                     throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Updates an annotation store.

This is a convenience which creates an instance of the UpdateAnnotationStoreRequest.Builder avoiding the need to create one manually via UpdateAnnotationStoreRequest.builder()

Parameters:

updateAnnotationStoreRequest - A Consumer that will call methods on UpdateAnnotationStoreRequest.Builder to create a request.

Returns:

Result of the UpdateAnnotationStore operation returned by the service.

See Also:

• AWS API Documentation

updateAnnotationStoreVersion

default UpdateAnnotationStoreVersionResponse updateAnnotationStoreVersion(UpdateAnnotationStoreVersionRequest updateAnnotationStoreVersionRequest)
                                                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Updates the description of an annotation store version.

Parameters:

updateAnnotationStoreVersionRequest -

Returns:

Result of the UpdateAnnotationStoreVersion operation returned by the service.

See Also:

• AWS API Documentation

updateAnnotationStoreVersion

default UpdateAnnotationStoreVersionResponse updateAnnotationStoreVersion(Consumer<UpdateAnnotationStoreVersionRequest.Builder> updateAnnotationStoreVersionRequest)
                                                                   throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Updates the description of an annotation store version.

This is a convenience which creates an instance of the UpdateAnnotationStoreVersionRequest.Builder avoiding the need to create one manually via UpdateAnnotationStoreVersionRequest.builder()

Parameters:

updateAnnotationStoreVersionRequest - A Consumer that will call methods on UpdateAnnotationStoreVersionRequest.Builder to create a request.

Returns:

Result of the UpdateAnnotationStoreVersion operation returned by the service.

See Also:

• AWS API Documentation

updateRunCache

default UpdateRunCacheResponse updateRunCache(UpdateRunCacheRequest updateRunCacheRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Update a run cache.

Parameters:

updateRunCacheRequest -

Returns:

Result of the UpdateRunCache operation returned by the service.

See Also:

• AWS API Documentation

updateRunCache

default UpdateRunCacheResponse updateRunCache(Consumer<UpdateRunCacheRequest.Builder> updateRunCacheRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Update a run cache.

This is a convenience which creates an instance of the UpdateRunCacheRequest.Builder avoiding the need to create one manually via UpdateRunCacheRequest.builder()

Parameters:

updateRunCacheRequest - A Consumer that will call methods on UpdateRunCacheRequest.Builder to create a request.

Returns:

Result of the UpdateRunCache operation returned by the service.

See Also:

• AWS API Documentation

updateRunGroup

default UpdateRunGroupResponse updateRunGroup(UpdateRunGroupRequest updateRunGroupRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Updates a run group.

Parameters:

updateRunGroupRequest -

Returns:

Result of the UpdateRunGroup operation returned by the service.

See Also:

• AWS API Documentation

updateRunGroup

default UpdateRunGroupResponse updateRunGroup(Consumer<UpdateRunGroupRequest.Builder> updateRunGroupRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Updates a run group.

This is a convenience which creates an instance of the UpdateRunGroupRequest.Builder avoiding the need to create one manually via UpdateRunGroupRequest.builder()

Parameters:

updateRunGroupRequest - A Consumer that will call methods on UpdateRunGroupRequest.Builder to create a request.

Returns:

Result of the UpdateRunGroup operation returned by the service.

See Also:

• AWS API Documentation

updateSequenceStore

default UpdateSequenceStoreResponse updateSequenceStore(UpdateSequenceStoreRequest updateSequenceStoreRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Update one or more parameters for the sequence store.

Parameters:

updateSequenceStoreRequest -

Returns:

Result of the UpdateSequenceStore operation returned by the service.

See Also:

• AWS API Documentation

updateSequenceStore

default UpdateSequenceStoreResponse updateSequenceStore(Consumer<UpdateSequenceStoreRequest.Builder> updateSequenceStoreRequest)
                                                 throws InternalServerException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Update one or more parameters for the sequence store.

This is a convenience which creates an instance of the UpdateSequenceStoreRequest.Builder avoiding the need to create one manually via UpdateSequenceStoreRequest.builder()

Parameters:

updateSequenceStoreRequest - A Consumer that will call methods on UpdateSequenceStoreRequest.Builder to create a request.

Returns:

Result of the UpdateSequenceStore operation returned by the service.

See Also:

• AWS API Documentation

updateVariantStore

default UpdateVariantStoreResponse updateVariantStore(UpdateVariantStoreRequest updateVariantStoreRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Updates a variant store.

Parameters:

updateVariantStoreRequest -

Returns:

Result of the UpdateVariantStore operation returned by the service.

See Also:

• AWS API Documentation

updateVariantStore

default UpdateVariantStoreResponse updateVariantStore(Consumer<UpdateVariantStoreRequest.Builder> updateVariantStoreRequest)
                                               throws InternalServerException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
AwsServiceException,
SdkClientException,
OmicsException

Updates a variant store.

This is a convenience which creates an instance of the UpdateVariantStoreRequest.Builder avoiding the need to create one manually via UpdateVariantStoreRequest.builder()

Parameters:

updateVariantStoreRequest - A Consumer that will call methods on UpdateVariantStoreRequest.Builder to create a request.

Returns:

Result of the UpdateVariantStore operation returned by the service.

See Also:

• AWS API Documentation

updateWorkflow

default UpdateWorkflowResponse updateWorkflow(UpdateWorkflowRequest updateWorkflowRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Updates information about a workflow. For more information, see Update a private workflow in the Amazon Web Services HealthOmics User Guide.

Parameters:

updateWorkflowRequest -

Returns:

Result of the UpdateWorkflow operation returned by the service.

See Also:

• AWS API Documentation

updateWorkflow

default UpdateWorkflowResponse updateWorkflow(Consumer<UpdateWorkflowRequest.Builder> updateWorkflowRequest)
                                       throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Updates information about a workflow. For more information, see Update a private workflow in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the UpdateWorkflowRequest.Builder avoiding the need to create one manually via UpdateWorkflowRequest.builder()

Parameters:

updateWorkflowRequest - A Consumer that will call methods on UpdateWorkflowRequest.Builder to create a request.

Returns:

Result of the UpdateWorkflow operation returned by the service.

See Also:

• AWS API Documentation

updateWorkflowVersion

default UpdateWorkflowVersionResponse updateWorkflowVersion(UpdateWorkflowVersionRequest updateWorkflowVersionRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Updates information about the workflow version. For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

Parameters:

updateWorkflowVersionRequest -

Returns:

Result of the UpdateWorkflowVersion operation returned by the service.

See Also:

• AWS API Documentation

updateWorkflowVersion

default UpdateWorkflowVersionResponse updateWorkflowVersion(Consumer<UpdateWorkflowVersionRequest.Builder> updateWorkflowVersionRequest)
                                                     throws InternalServerException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ConflictException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

Updates information about the workflow version. For more information, see Workflow versioning in Amazon Web Services HealthOmics in the Amazon Web Services HealthOmics User Guide.

This is a convenience which creates an instance of the UpdateWorkflowVersionRequest.Builder avoiding the need to create one manually via UpdateWorkflowVersionRequest.builder()

Parameters:

updateWorkflowVersionRequest - A Consumer that will call methods on UpdateWorkflowVersionRequest.Builder to create a request.

Returns:

Result of the UpdateWorkflowVersion operation returned by the service.

See Also:

• AWS API Documentation

uploadReadSetPart

default UploadReadSetPartResponse uploadReadSetPart(UploadReadSetPartRequest uploadReadSetPartRequest,
 RequestBody requestBody)
                                             throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This operation uploads a specific part of a read set. If you upload a new part using a previously used part number, the previously uploaded part will be overwritten.

Parameters:

uploadReadSetPartRequest -

requestBody - The content to send to the service. A RequestBody can be created using one of several factory methods for various sources of data. For example, to create a request body from a file you can do the following.

 RequestBody.fromFile(new File("myfile.txt"))
 

See documentation in RequestBody for additional details and which sources of data are supported. The service documentation for the request content is as follows '

The read set data to upload for a part.

'

Returns:

Result of the UploadReadSetPart operation returned by the service.

See Also:

• AWS API Documentation

uploadReadSetPart

default UploadReadSetPartResponse uploadReadSetPart(Consumer<UploadReadSetPartRequest.Builder> uploadReadSetPartRequest,
 RequestBody requestBody)
                                             throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This operation uploads a specific part of a read set. If you upload a new part using a previously used part number, the previously uploaded part will be overwritten.

This is a convenience which creates an instance of the UploadReadSetPartRequest.Builder avoiding the need to create one manually via UploadReadSetPartRequest.builder()

Parameters:

uploadReadSetPartRequest - A Consumer that will call methods on UploadReadSetPartRequest.Builder to create a request.

requestBody - The content to send to the service. A RequestBody can be created using one of several factory methods for various sources of data. For example, to create a request body from a file you can do the following.

 RequestBody.fromFile(new File("myfile.txt"))
 

See documentation in RequestBody for additional details and which sources of data are supported. The service documentation for the request content is as follows '

The read set data to upload for a part.

'

Returns:

Result of the UploadReadSetPart operation returned by the service.

See Also:

• AWS API Documentation

uploadReadSetPart

default UploadReadSetPartResponse uploadReadSetPart(UploadReadSetPartRequest uploadReadSetPartRequest,
 Path sourcePath)
                                             throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This operation uploads a specific part of a read set. If you upload a new part using a previously used part number, the previously uploaded part will be overwritten.

Parameters:

uploadReadSetPartRequest -

sourcePath - Path to file containing data to send to the service. File will be read entirely and may be read multiple times in the event of a retry. If the file does not exist or the current user does not have access to read it then an exception will be thrown. The service documentation for the request content is as follows '

The read set data to upload for a part.

'

Returns:

Result of the UploadReadSetPart operation returned by the service.

See Also:

• uploadReadSetPart(UploadReadSetPartRequest, RequestBody)
• AWS API Documentation

uploadReadSetPart

default UploadReadSetPartResponse uploadReadSetPart(Consumer<UploadReadSetPartRequest.Builder> uploadReadSetPartRequest,
 Path sourcePath)
                                             throws InternalServerException,
NotSupportedOperationException,
ServiceQuotaExceededException,
ThrottlingException,
ValidationException,
ResourceNotFoundException,
AccessDeniedException,
RequestTimeoutException,
AwsServiceException,
SdkClientException,
OmicsException

This operation uploads a specific part of a read set. If you upload a new part using a previously used part number, the previously uploaded part will be overwritten.

This is a convenience which creates an instance of the UploadReadSetPartRequest.Builder avoiding the need to create one manually via UploadReadSetPartRequest.builder()

Parameters:

uploadReadSetPartRequest - A Consumer that will call methods on UploadReadSetPartRequest.Builder to create a request.

sourcePath - Path to file containing data to send to the service. File will be read entirely and may be read multiple times in the event of a retry. If the file does not exist or the current user does not have access to read it then an exception will be thrown. The service documentation for the request content is as follows '

The read set data to upload for a part.

'

Returns:

Result of the UploadReadSetPart operation returned by the service.

See Also:

• uploadReadSetPart(UploadReadSetPartRequest, RequestBody)
• AWS API Documentation

waiter

default OmicsWaiter waiter()

Create an instance of OmicsWaiter using this client.

Waiters created via this method are managed by the SDK and resources will be released when the service client is closed.

Returns:

an instance of OmicsWaiter

create

static OmicsClient create()

Create a OmicsClient with the region loaded from the DefaultAwsRegionProviderChain and credentials loaded from the DefaultCredentialsProvider.

builder

static OmicsClientBuilder builder()

Create a builder that can be used to configure and create a OmicsClient.

serviceMetadata

static ServiceMetadata serviceMetadata()

serviceClientConfiguration

default OmicsServiceClientConfiguration serviceClientConfiguration()

Description copied from interface: SdkClient

The SDK service client configuration exposes client settings to the user, e.g., ClientOverrideConfiguration

Specified by:

serviceClientConfiguration in interface AwsClient

Specified by:

serviceClientConfiguration in interface SdkClient

Returns:

SdkServiceClientConfiguration